Halomonas sp. A40-4: IT895_02100
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Entry
IT895_02100 CDS
T11047
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K11908
sigma-54 dependent transcriptional regulator
Organism
hspe Halomonas sp. A40-4
Brite
KEGG Orthology (KO) [BR:
hspe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hspe03000
]
IT895_02100
Transcription factors [BR:
hspe03000
]
Prokaryotic type
Helix-turn-helix
Other families
IT895_02100
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA_2
AAA
TIP49
Torsin
AAA_19
TsaE
NEL
wHTH-HSP90_Na-assoc
Motif
Other DBs
NCBI-ProteinID:
QPL46632
UniProt:
A0A7T0RFC4
LinkDB
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Position
427383..428975
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AA seq
530 aa
AA seq
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MTSAADATSTAKSALSAELAAMPLALMLVESRSTSMLRQRAAQLLQDQLGLASAECLYID
GSGRWLGRDGDEGQFDCSDFNHPYAHVIRSGKALTLSVADARTRLDDATFQQQVAALGAG
SYLHIRPLRAADKGREWLGVMVLVGTQSRVRSLTEDPGMVAFDALLCRVWARLAREQGER
QRSRLLQDSLAKLNDGARRQALADQLADDLLGQSSAMQALRRHVVRAAETNLAVLLQGET
GTGKDRVARAIHQLSGRSKGPFMAINCAAIPEALLESELFGHAKGAFSGADQAREGLISQ
ADGGTLFLDEIGDMPLALQAKLLRVLESGRYRPLGASEERCANLRLVAATHQPLREQIRE
QRFRADLYYRLGQFPLELPPLCERRDDIATLAQSFIRDFCEREGRDEMGITPAALRLLYR
RDYPGNVRELKNVIDYACAMTPQGADIDAYLLPGEQSDQTSSASEVTEDAGFALPDDIDD
LRQALRDVESAIIRQRLRRFGGNRAQVAESLGLPKRTLAHKCQLLELDTK
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctgctgccgatgccacatccactgccaagagtgcgttatcagctgaactggcg
gctatgccattggcattgatgctggtggaaagtcgctcaacgtcgatgttgcgccagcga
gcagcccaactgctgcaagaccaactggggctggcatcggccgaatgcctgtatatcgat
ggcagcggccgctggctggggcgagatggcgatgaggggcagtttgattgcagcgatttc
aatcacccctatgcccacgtcattcgcagcggcaaagcgttgacccttagcgtcgccgat
gcacgcacacgcctggatgatgccactttccagcaacaggtggccgcacttggcgcaggc
tcgtacctgcacatccgccccctgcgggcggcggacaaaggccgcgaatggctgggggtg
atggtattggtaggcacccagtcaagggtacgcagcctgacggaagaccccggcatggtg
gcgtttgatgccttgttgtgccgtgtatgggcccgattggcccgggagcagggggagcgt
cagcgctcacgcttgctgcaagattcgcttgccaaactgaacgatggtgcccgtcgccag
gcactggctgatcagctcgccgacgacctgctgggtcagtcgtcagccatgcaagcactg
cgccggcatgtggtgcgtgcggccgaaacaaatctggcagtcctcctccagggtgaaact
ggcacgggcaaagaccgggtggctcgggctatccatcagctttcaggacggtcaaaaggt
cccttcatggcgattaactgtgccgccattcccgaagcgctgcttgagtcagagcttttt
ggccatgccaagggggctttttccggggccgaccaggcccgcgaaggactcatcagccaa
gcggatggaggcacgttattccttgatgaaattggtgatatgccgttagccctgcaagcc
aaactgttgcgtgtgctggaaagcggccgctaccgaccgctcggggccagtgaggaacgc
tgcgcgaatttgcgcctggtggcggccacgcatcaaccgctgcgtgaacagattcgtgag
cagcggtttcgcgcagacctttactaccggttaggccagttccctcttgaattgccacca
ctttgcgaacggcgcgacgatattgccacgttagcccagtcctttattcgcgacttttgt
gaacgcgaaggacgggacgaaatgggcattacccccgccgcactgcgcctgctgtatcgc
cgcgattacccgggcaacgtccgcgaactaaaaaacgtgattgattatgcctgcgccatg
acgcctcagggggccgatatcgacgcttacctgttgccgggtgaacaaagcgatcaaacc
tcatcggcatcggaggtgacggaagacgctgggttcgcactacctgatgacattgatgac
ctgcgccaagccctgcgcgatgtcgagtccgccattatccgtcaacgcttgcggcggttc
gggggcaatcgtgcccaggtagcagaaagcctcggtttacccaagcgaaccctggcccat
aaatgccagctattagaactggataccaaatga
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