Halomonas sp. A40-4: IT895_02265
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Entry
IT895_02265 CDS
T11047
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
hspe Halomonas sp. A40-4
Pathway
hspe02024
Quorum sensing
hspe03060
Protein export
hspe03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hspe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
IT895_02265 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
IT895_02265 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IT895_02265 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hspe02044
]
IT895_02265 (ffh)
Enzymes [BR:
hspe01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
IT895_02265 (ffh)
Secretion system [BR:
hspe02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
IT895_02265 (ffh)
Eukaryotic Sec-SRP protein
IT895_02265 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_22
cobW
AAA_16
ArsA_ATPase
NAT10_TcmA_helicase
AAA_33
YqeC
nSTAND3
AAA_30
nSTAND_NTPase5
AAA_14
AAA_31
MMR_HSR1
KTI12
6PF2K
APS_kinase
ResIII
Thymidylate_kin
KAP_NTPase
AAA_19
ParA
TctA
NPHP3_N
AAA_28
AAA_17
TsaE
DnaB_C
NACHT
VirC1
DO-GTPase1
Motif
Other DBs
NCBI-ProteinID:
QPL46662
LinkDB
All DBs
Position
468816..470237
Genome browser
AA seq
473 aa
AA seq
DB search
MFSTLSERLSQTLKSIKGQARLTEDNIKDTLREVRRALLEADVALPVVKDFVERVRERAV
GQEVSKSLSPGQQFVKIVQQELEATMGEANEGLTLKSSPSVVLMAGLQGAGKTTSVAKLA
RYLREREKKKVLVVSADVYRPAAIDQLETLAKEVEVDFFPSRSDQAPVAIAEAAIKHAKI
QFHDVVLIDTAGRLAIDEAMMSEIQALHKAVTPDETLFVVDAMTGQDAVNTAKAFHDALP
LTGVVLTKADGDARGGAALSVRHVTGKPIKFMGVGEKVDALEPFHPDRVASRILGMGDML
SLIEEAERTVDKSKADQLAKKVKKGDGFDLEDFREQLQQLKKMGGMGGLLGKLPGMGQMA
DMAQGPGPEKELGKLEALINSMTPKERHKPEIINGSRKRRIAAGAGLQVPDLNRLLKQHK
QMQKMMKKAGKKGGMEKMMRGMSGMMGGGGGPGGPGGMGGPGGMGGPGGFPRR
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgactcttagtgagcgtctttcccagacgttaaaatcgatcaaaggtcaggca
cgcctgaccgaagacaatattaaagataccctgcgagaagttcgtcgtgcgctgcttgag
gcagacgtggcgctgcccgtggtcaaggacttcgtcgagcgggtgcgcgaacgagccgtg
gggcaagaggtatccaaaagtctttcgcccggtcagcagttcgtcaagattgtccagcaa
gagctggaagccaccatgggcgaagcgaacgagggactgacattaaagagctccccgtcc
gtagtgctgatggcgggtttgcagggcgcgggtaaaaccacctcggtagcgaaacttgcg
cgttacctgcgggaacgtgaaaagaaaaaggtcctggtggtttcggccgatgtctaccgc
cccgcggcgattgatcaattggaaaccctggccaaagaggtggaagtcgacttctttccc
tcccgctcggatcaggcgccagtggcgattgccgaagcggccatcaagcacgccaaaatc
cagtttcacgacgtcgtattgatcgataccgcaggccgtctggctatcgatgaagccatg
atgtcggaaattcaggcgttgcataaagccgtcacgccggatgaaaccctgtttgtcgtc
gatgccatgaccggccaggatgcggtcaataccgcaaaagcgttccatgacgctctgccg
ctcaccggggtggtgctgaccaaagccgacggtgacgcgcggggcggtgctgcgctctct
gtgcgccatgtcaccggcaagccgatcaagttcatgggcgtgggtgaaaaagtcgacgcc
ttggaacccttccaccctgaccgggtcgcctcgcggattctgggcatgggggacatgctc
tcgctgatcgaggaagccgagcgcacggttgataaatccaaagccgaccaattggccaaa
aaggtcaagaaaggcgacggcttcgacttggaagactttcgcgagcaactgcagcaactc
aagaaaatggggggcatgggtggtttgctcggcaaattgccgggtatggggcagatggcg
gatatggcccaagggcctggtcccgaaaaagagctcggcaagctggaggcgttgatcaac
tccatgacccccaaagagcgccacaagcctgaaatcatcaacggctcacgcaagcgccgt
attgcagcgggtgcgggacttcaggtgccggacttgaaccgtctgctcaagcagcacaag
cagatgcagaagatgatgaagaaagccggcaaaaaaggcggcatggaaaaaatgatgcgt
ggcatgtccggcatgatgggcggcggtggcggcccaggcggtcccggtggcatgggtggc
cctggcggcatgggtggtccgggtggattccctcgccgctag
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