Halomonas sp. A40-4: IT895_04835
Help
Entry
IT895_04835 CDS
T11047
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hspe Halomonas sp. A40-4
Pathway
hspe03420
Nucleotide excision repair
hspe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hspe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IT895_04835
03430 Mismatch repair
IT895_04835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hspe03400
]
IT895_04835
Enzymes [BR:
hspe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IT895_04835
DNA repair and recombination proteins [BR:
hspe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IT895_04835
MMR (mismatch excision repair)
Other MMR factors
IT895_04835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
Beta-prop_DCAF4
Motif
Other DBs
NCBI-ProteinID:
QPL47115
UniProt:
A0A7T0WEW1
LinkDB
All DBs
Position
1010046..1011971
Genome browser
AA seq
641 aa
AA seq
DB search
MSKELYLAETRPVNHDNSIDKGIQECLHIGSRKSFITFAGAGSGKTYSLKEALDFLKAQY
SDDFSRQGKKIAVVTFTNNAAEEIKDRIEQNVVFAVSTVHSFCWSAIAGFNEDIRKWYLE
TIPSELEKVQDEERRGRAGKASDARKRTIIRLTEKMEWLAESRSFIYDPNGLKSSQNALS
HADVLKIFSHFLTTKPMMAEVIVNKFPFIFIDESQDTNKDVVSAFFELQDAKSDKVVIGL
FGDTMQRIFGGGEPELGKTKPIGWTTFDKKMNHRSARRIVGLGNQIRYEDDKRKQYARDG
AAEGYVRYFLLPHGVPNKDEVEAKIRETMAEVTGDTEWTDTRSKETAILILEHKMAGRRL
GFDDLWDNLSKSSSIKDRISEGENAELNFFSYLVFPLADASLKKRPAELMYILRESKSPL
LETSVFDVNKDDPLALARAAEHDFRDVISNDKVSFREVLEVLAEHKLLRIPSKLQSFVAH
SEESEIESETEQKEALLEIEEEPEGWDDSEIAAWAEALETDFFQIRYYKDYIDENSIFRT
HQGVKGNEFERVMVVMDDDEAGGFLFSYEQYFGAKELSPASQKKRNEGEETGLDRTRRLF
YVTSTRAKSSLAHVIYTSDIAKVRENLIKKRFAREDEIFEF
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagaattatacttagcagaaaccagacctgttaatcatgacaatagcattgat
aaaggtatccaagagtgtctccatatagggtcgaggaaaagctttatcacctttgcaggg
gctgggtcgggaaaaacctactctctaaaagaagctcttgattttctgaaagctcaatac
tctgatgacttttcccgccagggaaagaaaatcgcggttgttacctttacaaacaatgca
gcagaagaaatcaaagaccggatcgagcaaaatgtagtctttgccgtctcaacggttcat
agcttttgttggtcggctattgctggcttcaatgaagacattcgtaagtggtacttggag
acgatcccctctgagctcgagaaggttcaagatgaggaaagacgtggacgtgctggaaag
gcttcggatgctcgcaaaagaactatcatccgtctcactgaaaaaatggaatggttagcc
gaatcacgttcgtttatttacgacccaaacggcctcaaatcgtctcagaatgcattgtct
cacgcggatgttttgaaaattttctcccactttttgaccactaagccgatgatggccgaa
gtcatagtaaataaattccctttcatattcatcgatgaaagccaggatacgaacaaagat
gtagtgagcgcattttttgaactgcaagatgcaaaatcggataaagtagttataggcttg
tttggagatacgatgcaacgcatctttggcggaggagaacctgaactaggtaagactaag
ccaatcgggtggaccactttcgacaagaaaatgaaccatcgctcagctaggcgcatcgtt
ggtttgggtaatcaaattcgttatgaagatgataaacgcaaacagtatgcccgcgatgga
gctgcagaaggttacgtacgatatttcttacttccacacggcgtgccaaataaagacgaa
gttgaagcgaaaattcgtgaaactatggccgaagttacgggtgacacggaatggacagat
actcgatctaaagaaaccgctattttaattttggaacataaaatggctgggcgtcggctt
ggctttgatgatctttgggacaacctctcaaagtcaagcagtattaaagaccgaatttcc
gaaggtgaaaatgccgaattaaattttttctcttatcttgtttttcctttggctgatgca
agcctgaaaaaaagaccagccgaattgatgtatatcttgagagaaagcaaatcgcctctg
ttggaaactagtgtgtttgacgttaacaaggacgatccgctcgcgcttgcccgagctgcg
gaacatgattttagagatgtgatttcaaatgataaagtcagttttcgcgaagttctagaa
gtgcttgctgagcacaagctcctgagaattccatccaaattgcagtcgtttgtggcacat
tccgaagaaagtgagattgaatcagagacagaacaaaaggaagctttactggaaatcgaa
gaagaacctgaaggctgggatgacagcgagattgctgcttgggctgaagctttggagact
gatttttttcagattcggtactataaggactacattgatgagaactccatttttcggact
catcaaggtgtgaagggcaacgaattcgagcgtgttatggttgtcatggatgatgatgaa
gcaggcgggttcttgttttcctacgagcagtattttggcgcgaaggaactttcaccagca
agtcagaagaaacggaatgaaggcgaagaaactggcttggatcgcactcggaggttgttt
tatgtcacatccacacgagcgaagagcagcctcgcccatgtgatttatacttccgatatt
gctaaggtacgggaaaatcttattaaaaaaagatttgcgcgagaagatgaaatttttgag
ttttaa
DBGET
integrated database retrieval system
