Halomonas sp. A40-4: IT895_04895
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Entry
IT895_04895 CDS
T11047
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
hspe Halomonas sp. A40-4
Pathway
hspe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hspe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IT895_04895 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hspe03400
]
IT895_04895 (recC)
Enzymes [BR:
hspe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
IT895_04895 (recC)
DNA repair and recombination proteins [BR:
hspe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IT895_04895 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QPL47125
LinkDB
All DBs
Position
complement(1026761..1030345)
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AA seq
1194 aa
AA seq
DB search
MPANSLLSPTSLTPGFMVVHGNRLEDLRGLAVEWMRLHPLGPLENETILVQSNGIGQWLK
LALAEDPDNGGAGIAAALDVMLPARFLWQAYRTVLTHVSNNEDAVPETSPFDKSRLVWRL
LRLLPTLAEQDVFAPLAQFLEVDRDQRKHYQLAERLADLFDQYQVYRADWLDAWANGDDV
LITARGETRPLEDHQRWQPALWRILREDVAATQGDAGLDSSRAQVHRRFLKATEQLDGQT
CPPGLPRRLIIFGISSLPQQTLEALAALSRCCQVVLCVHNPCQFYWADIIEHKDLLRASR
YRQRRKTGMPEALDVLGTGDADDALHLHAQPLLAAWGKQGRDYLRLLDEHDDTGDYQTLF
EQQALRIDMFEPFSGERGCLLSQLQDDIRELRPVAETQTHWPALDPADDSLVFHIAHGPQ
REVEILHDQLLAAFSADPELRPRDIIVMVPDIDRYAPHIDAVFGQLQGDDPRFIPYTLSD
QASRHRLPMMIALEKLLRLPELRLSVSDLLDLLDVPALRQRFGLEERDLPVLERWMEGAG
IRWGLNAKQRQTLELPGGLSQNTWAFGLRRLLLGYTVGEGNAWQGIEPFDDIGGLEAGLA
GPLATLLEKLEATWETFRQPTDAASWVERLRTLLETFFLTDDAQESVMLTKLENGLQQIL
ESSREAQLEDPLPLSMVREHWLAQIDEHSLSQRFLAGAVNFATLMPMRAIPFKRVCLLGM
NDGEYPRSQPPLDFDLMGSDYRPGDRSRREDDRYLFLEALLSARDQLYISWVGRSQIDNT
PLPPSVLVGQLRDHLAAGWHFEHGAPLLDALTTEHPLQPFSRAYFQDGNDAGRLFTYVHE
WRGAHVWRDEHAPRAPQAAKAPLPKPENAPSSLNLGQLGGFLREPVRTFFNTRLGVYFEQ
EAIAELDAEPFALDGLQNWQLQDRLIAAQRHAVDNGEPRLEALDAQLERFQGQGVLAMGA
FGERMRNALAEPMDDLFSAYQEALDQWPIALPAPEPVRVESADGIVLEDWLNELRQNEAG
DRCRLLLLSSSLISQGSGRGQYRWTHLLRPWVAHLAGNLSGPMTTQLLSKAGNITLDPIA
ADTARAHLDTQMTAWQAGLEAPLPLAPQAAFAWLTKLGTPEIAEDKGRESDAYAAAEGAY
DGGRFQTGEVAQSAYLSHQWPRFERLFNEQTQHGHRFAALTEALYAPLFYAVKG
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccaattcgctgctttcgccaacatcgctaacgcccgggttcatggtggtgcat
ggcaatcgcctggaagatttgcgcgggctggcggtggagtggatgcgcctgcacccgctg
gggccgctggagaacgaaaccattctggtgcagagcaacggcatcgggcagtggctgaag
ctggcgctggcggaagacccggacaacggcggcgcggggatcgcggcggcgctggacgtc
atgctgcccgcgcggttcctgtggcaggcctaccgcacggtgctgactcacgtatcgaac
aacgaagacgccgtgccagaaacctcgccgttcgataaatctcgcctggtctggcggctg
ttacgtctgctgcccaccctggccgagcaggacgtgtttgccccgctggcgcagtttctg
gaagtcgaccgcgaccagcgcaagcactaccagctggccgagcggctggcggacctgttc
gaccagtatcaggtctatcgcgccgactggctggacgcctgggccaacggcgacgacgtg
ctgatcaccgcccgcggcgaaacccgccccctggaagaccaccagcgctggcagcccgcg
ctgtggcgcatcttgcgtgaggatgtggccgccacccagggcgatgcgggcctcgacagc
agccgcgcccaggtgcatcggcgctttttgaaggccaccgagcaattggacggccagacc
tgcccgccgggcctgccccggcggctgatcattttcggcatctcgtcgctgccccagcag
acgctggaagccctggcggcgctctcgcgctgctgccaggtggtgctctgcgtgcacaac
ccctgccagttctactgggcggatatcatcgagcacaaggacctgctccgcgccagccgc
taccgccagcggcgcaagaccggcatgcccgaagcgctggacgtactgggcaccggcgac
gctgacgatgccctgcacctgcatgcccagccgctgctcgccgcctggggcaagcagggc
cgcgactacctgcgcctgctggacgagcacgacgacaccggcgactaccagaccctgttc
gagcagcaggcgctgcgcatcgacatgttcgagccgttctccggcgagcgcggctgcctg
ctcagccagttgcaggacgacatccgcgagttgcgcccggtggccgaaacccagacccac
tggcccgccctcgacccggcggatgactccctggtgtttcatatcgcccacggcccccag
cgggaagtcgagattctccacgaccagctgctcgccgcgttcagcgccgaccccgagctg
cgcccgcgggacatcatcgtcatggtgccggacatcgaccgctacgcgccgcacatcgac
gcagtattcggccagcttcaaggcgacgacccgcgcttcatcccctacacgctttccgac
caggccagccgccatcgactgccgatgatgatcgcgctggaaaagctgctgcgcctgccg
gagctgcgcctgtccgtcagcgacctgctggacctgctcgacgtgcccgccctgcgccag
cgcttcgggctggaagaacgcgacctgccggtgctggagcgctggatggaaggcgcgggc
atccgctgggggctgaatgccaaacagcgccagactctcgaactgcccggcgggctcagc
cagaacacctgggcctttggcctgcgccgcctgctgctggggtatacggtaggtgaaggt
aatgcctggcagggcatcgagccgttcgacgacatcggcgggctggaagcgggccttgct
ggccccttggcgacgctgctggaaaagctcgaagccacctgggagaccttccgccagccc
accgatgccgccagttgggtcgagcggctgcgcaccctgctggaaaccttcttcctcacc
gacgacgcccaggaaagcgtcatgctcaccaagctggaaaacggcctgcagcaaatcctc
gaaagcagccgcgaagcccagctggaagacccgctgccgctttccatggtgcgcgaacac
tggctggcgcagatcgacgagcacagcctttcccagcgctttctggccggggcggtgaac
ttcgccacgctgatgcccatgcgcgccatccccttcaagcgcgtgtgcctgctgggcatg
aacgacggcgaatacccccgctcccagccgccgctggactttgacctgatgggcagcgac
taccgccccggcgaccgctcccgccgggaagacgaccgctacctgtttctcgaagcgctg
ctctccgcccgggaccagctctacatcagctgggtcggccgcagccagatcgacaacacg
ccgctgccgccctcggtactggtcggccagttgcgcgaccacctggccgccggctggcac
tttgaacacggcgccccgctgctcgacgccctgaccaccgaacacccgctgcagccgttc
agccgcgcgtatttccaggatggcaacgacgctgggcgactgtttacctatgttcatgaa
tggcgtggggcccatgtatggcgagatgagcacgcgccgcgtgccccccaggccgccaaa
gcgccgttacccaagccggaaaacgcgccctccagccttaatctcggtcaactgggcggc
tttctgcgcgaaccggtgcgtaccttcttcaatacccggctaggggtgtatttcgagcag
gaagccatcgccgagctggacgccgaacccttcgccctggacggcctgcagaactggcag
ctgcaggaccggctcatcgccgcccagcgccacgcggtggacaacggcgagccacgcctg
gaagccctcgacgcccagcttgagcgcttccagggtcagggtgtgctcgccatgggggcc
tttggcgagcgcatgcgcaacgccctggccgagcccatggacgacctgttcagcgcctac
caggaagcactggaccagtggcccatcgccttgcccgcgccggagccggttcgcgtagaa
agcgccgacggcatcgtgctggaagactggctgaacgaactgcgccagaacgaggccggt
gaccgctgccgcctgctgctgctcagcagcagcctgatcagccagggcagcgggcgcggc
cagtaccgctggacccatctgctgcgcccctgggtcgcccatctggcgggcaacctcagc
ggcccgatgaccacccagctactttccaaggcgggcaacatcacgctggaccccatcgcc
gccgacaccgcccgcgcccacctggacacccagatgaccgcctggcaagcaggccttgaa
gccccactaccgctggccccccaggccgcctttgcctggttgaccaagctaggcacgccg
gagatcgccgaagacaaaggccgggaaagcgacgcctacgccgccgccgaaggcgcctat
gacggcggccgcttccagaccggcgaagtcgcccaaagcgcttaccttagccaccagtgg
ccccgcttcgagcggctattcaacgagcaaacccaacacggccaccgcttcgccgcgctg
accgaagcgctctacgccccgctgttttatgcggtaaagggttag
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