Halomonas sp. A40-4: IT895_07015
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Entry
IT895_07015 CDS
T11047
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
hspe Halomonas sp. A40-4
Pathway
hspe00071
Fatty acid degradation
hspe00280
Valine, leucine and isoleucine degradation
hspe00310
Lysine degradation
hspe00362
Benzoate degradation
hspe00380
Tryptophan metabolism
hspe00410
beta-Alanine metabolism
hspe00640
Propanoate metabolism
hspe00650
Butanoate metabolism
hspe00907
Pinene, camphor and geraniol degradation
hspe00930
Caprolactam degradation
hspe01100
Metabolic pathways
hspe01110
Biosynthesis of secondary metabolites
hspe01120
Microbial metabolism in diverse environments
hspe01200
Carbon metabolism
hspe01212
Fatty acid metabolism
Module
hspe_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
hspe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
IT895_07015 (fadB)
00650 Butanoate metabolism
IT895_07015 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
IT895_07015 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
IT895_07015 (fadB)
00310 Lysine degradation
IT895_07015 (fadB)
00380 Tryptophan metabolism
IT895_07015 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
IT895_07015 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
IT895_07015 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
IT895_07015 (fadB)
00930 Caprolactam degradation
IT895_07015 (fadB)
Enzymes [BR:
hspe01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
IT895_07015 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
IT895_07015 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
IT895_07015 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
IT895_07015 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QPL47497
LinkDB
All DBs
Position
1497179..1499356
Genome browser
AA seq
725 aa
AA seq
DB search
MIYQGNAITVERRDTQGGNDIATLTFDLKDESVNKLSSAVVTELGEAVKALQAEAGLQGL
VIGSAKEAFIVGADITEFHTLFDKGEEYLVEMNLKVHDIFNAIEDLPFPTVTAINGLALG
GGCEVLLTTDFRVMSEKAKIGLPETKLGILPGWGGCVRLPRLIGADNAIEWIAGGTENRA
DAALKMGAVDAVVAHELLESAALDILDRANAGELDYQARRDEKTSPLKLNAIEQMMAFET
AKGYVAGKAGPYYPAPVEAIKVIQKGAGEERGRAQAIEAKAFAKLALSSVAFNLVGLFLN
DQVVKKKGSQYEKQAQPVNQTAVLGAGIMGGGIAYQSASKGTPILMKDIKDDAIELGLKE
ARKLFAKQVERNKLTTEQMAEKLSNIRPTLSYGDFGNVDLVVEAVVENPKVKDAVLTEVE
GMVSENTILTSNTSTISINRLAKNLQRPENFCGMHFFNPVHRMPLVEVIRGEKTSDAAVA
ATVAYARAMGKTPIVVNDCPGFLVNRVLFPYFGGFSFLVEQGADFQHVDKVMEKFGWPMG
PAYLLDVVGMDTAVHANEVMAEGFPDRMARDGKTAIQVMYDNERLGQKNDKGFYTYEEDK
KGKPKKVTDEAAYTLVNEVVKEHKEFSDEDIIARMMVPLCLETVRCLEDGIVATPAEADM
ALIYGIGFPPFRGGALRYIDAMGVAEFVKLAEGLADELGPLYAPTDKLRQMAKNGERFYT
ADGQA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgatctatcaaggcaatgccatcacggtggagcgtcgtgacacccagggtggcaatgac
atcgcaacgctcactttcgatttgaaagatgagtccgtcaacaagctgtccagcgccgtg
gtgacagagctgggagaagcggtaaaagcccttcaggcagaagccggtttgcagggactg
gtcattggcagtgccaaagaagcctttattgtcggtgctgatattaccgagttccacacc
ctgttcgataaaggcgaagagtacctggtggaaatgaacctcaaggttcatgacatcttc
aacgccattgaagatttacctttccccacggtcacggcgatcaacgggctggcgttgggc
ggcggctgcgaagtactgctgaccaccgatttccgtgtgatgagcgaaaaggccaagatt
ggcctgccggaaaccaagctgggcattctgccgggctggggtggttgcgttcgtctgccg
cggctgatcggcgccgacaatgcgattgaatggatcgccggcggtacggaaaatcgtgcg
gacgctgcgctcaagatgggagccgtcgatgccgtcgtcgcccatgagctgctcgaaagc
gccgcgctggatatcctcgaccgcgctaatgccggcgagctcgactatcaagcgcgccgc
gacgaaaagaccagcccgctcaagctcaatgccatcgagcagatgatggcgtttgaaacc
gccaagggttacgtggcaggcaaggcggggccgtactatcccgcgccggtcgaagccatc
aaggtaatccagaagggcgctggtgaggagcgtggtcgcgctcaggcgatcgaggccaag
gcttttgccaagctggcgctgagcagcgtggcgttcaacctggtgggtctgttcctcaac
gaccaggtggtcaagaaaaaaggcagccagtacgagaagcaggcgcagccggtcaaccag
accgcggtgctgggcgcgggtatcatgggcggcggtatcgcctatcaaagcgcctcgaaa
ggcacgcccatcctgatgaaagatatcaaggatgacgccatcgagctgggcctcaaggaa
gcccgcaagctgtttgccaagcaggtcgagcgtaacaagctgaccaccgagcaaatggcc
gagaagctgagcaatattcgcccaacgctctcctacggcgatttcggcaatgtcgacctg
gtggtcgaggccgtggtcgaaaaccccaaggtcaaggacgccgtgttgaccgaagtagaa
ggtatggtcagcgagaatacgattcttacctctaacacctcgaccatttccatcaaccgc
ctggccaagaacctccagcgtccggaaaacttctgcggcatgcacttcttcaacccggtg
caccgtatgccgctggtggaagtaatccgcggtgagaaaacctcggatgccgcggtagcc
gccacggtcgcctacgcgcgtgccatgggcaaaacgccgatcgtggtcaacgactgcccc
gggtttctggtcaaccgagtgctgttcccgtacttcggtggtttcagcttcctggtcgag
caaggcgccgacttccagcacgtcgacaaggtaatggagaagtttggctggccgatgggc
cctgcgtatctgctggacgtggtcggtatggatacggcggttcacgccaacgaggtcatg
gccgaaggcttcccggatcgaatggcccgtgacggcaagaccgccatccaggtcatgtac
gacaacgagcgcctcggtcagaagaatgacaagggcttctacacctacgaagaggataaa
aagggtaagcccaagaaagtcaccgatgaagcggcctacaccttggtcaatgaagtggtg
aaagagcacaaggagttttcggacgaggacattatcgcccgcatgatggtgcccctctgc
ctggagaccgtgcgctgcctggaagacggtattgtcgcgacgcccgccgaagctgatatg
gcgcttatttatggtatcgggttcccgccgttccgcggcggggcgttgcgctacattgac
gccatgggtgtggccgagttcgtcaagctggccgaaggcctggccgatgagttgggaccg
ctctacgcgcccaccgacaagctgcgccagatggctaagaatggcgaacgcttttatacc
gccgacggtcaggcctaa
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