Halomonas sp. A40-4: IT895_07860
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Entry
IT895_07860 CDS
T11047
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hspe Halomonas sp. A40-4
Pathway
hspe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hspe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IT895_07860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hspe02000
]
IT895_07860
Transporters [BR:
hspe02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
IT895_07860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QPL47657
UniProt:
A0A7T0WFV0
LinkDB
All DBs
Position
complement(1674409..1675986)
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AA seq
525 aa
AA seq
DB search
MTFKKTLLASVIGATLASTALLSTAAQAENTLRMAYDADPVSLDIHEQLSGGILQLSHMT
HDPLVRWNDALEFEPRLASDWERIDDTTMRMSLREGVEFHSGNAFTADDVVWTIERLQRS
PDFKAIFDPIESVTAVDDYTVEITTKTPYPLLLNLATYVFPMDSAFYSGEAEDGDPKDEI
VKNGNSFASRNVSGTGPYTVADRQQGVRTEFERNPNYWDTESPGNVDNIILTPISENATR
VAALLSGDVDFIAPVPPNDLERVRESEDAQLVTMSGTRIIFFHMNQERVEAFQDPRVRQA
FAYAVNQEAIADRLMKGFATPAAQFSPEGYAGHIESLELRHDLERAKELMAEAGYEDGFD
ITMMAPNNRYVNDAKIAQAVAAMLARINVNVDLSTLPKAQYWGEYDDRAADMMLIGWHAD
TEDSANFHEYLTACPDPDTGAGQYNAGNYCNPELDALVAEANVEVDRAKRAAMLQEVEQT
LYDEAAIIPLHWQDLAWASANHVNIEPVVNVMNFPYLGDLVMDAE
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttaaaaaaacgctactagcttccgtgattggcgcaacgcttgccagcacagcc
ctcctgtccactgccgcacaggccgaaaacacgctgcgtatggcctacgatgccgacccg
gtatcgctggatattcacgaacagctgtcgggcgggatcctgcagctgtcgcacatgacc
cacgacccgctcgtgcgctggaatgatgcgcttgaattcgagccgcgcctggcctctgac
tgggaacgcatcgacgacaccaccatgcgtatgtcgctgcgcgaaggggttgaatttcac
agcggaaacgccttcactgccgacgatgtcgtctggactatcgagcgtctccagcgcagt
cctgacttcaaagcgatttttgaccccatcgaaagcgtcactgccgttgacgactacacg
gtagaaatcaccaccaagacaccctacccgctgctgttgaacctggcgacttacgtcttt
cccatggatagcgccttctattcaggagaagccgaggacggtgacccgaaagacgaaatc
gtcaaaaacggcaactcctttgcctcacgtaacgtttcaggcaccggcccttataccgtc
gccgatcgtcagcagggtgttcgtaccgagttcgagcgcaaccctaactattgggacacc
gaatcaccgggcaatgtcgataacatcatcctcacgcccatcagtgaaaacgcgacccgc
gtggcggcactgctttccggcgacgttgatttcattgccccggtaccgcccaatgacctg
gaacgcgttcgcgaaagcgaagacgcccagctcgtaacgatgtcgggcacgcgaatcatc
ttcttccacatgaaccaggagcgtgtcgaggcgttccaggatccacgcgtacgtcaagcc
tttgcctacgccgttaatcaggaagcaattgctgaccggttgatgaaaggctttgccacg
cctgccgcgcagttttctccggaaggttacgctggtcatatcgaaagccttgagcttcgc
cacgacctggagcgtgccaaggaactgatggccgaagcaggctatgaagacggctttgac
atcacgatgatggcgcccaacaaccgctacgtgaacgatgccaagattgcccaggccgtg
gcagcgatgctggctcgcatcaacgtcaacgtggatctgagcacgcttcccaaagcacaa
tactggggcgagtacgatgaccgcgccgccgacatgatgctgatcggctggcacgcagac
accgaagacagcgccaatttccacgaatacttgacggcctgcccggatccggacaccggc
gccggacagtacaatgcaggtaactactgcaatccagagcttgatgcactggtggccgag
gccaacgtggaagtggatcgcgccaagcgtgcggccatgcttcaggaagtcgagcaaaca
ctttacgacgaagctgcgattataccgctgcattggcaggacctggcctgggcgtcggcc
aatcacgtcaacatcgagccggtggtcaacgtgatgaacttcccctacctgggtgacctg
gtcatggacgccgaataa
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