Halomonas sp. A40-4: IT895_09740
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Entry
IT895_09740 CDS
T11047
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hspe Halomonas sp. A40-4
Pathway
hspe03030
DNA replication
hspe03430
Mismatch repair
hspe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hspe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IT895_09740
03430 Mismatch repair
IT895_09740
03440 Homologous recombination
IT895_09740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hspe03032
]
IT895_09740
03400 DNA repair and recombination proteins [BR:
hspe03400
]
IT895_09740
Enzymes [BR:
hspe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IT895_09740
DNA replication proteins [BR:
hspe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IT895_09740
DNA repair and recombination proteins [BR:
hspe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IT895_09740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
PAS_4
PAS
MASE1
Rv2179c-like
PAS_8
Motif
Other DBs
NCBI-ProteinID:
QPL47989
LinkDB
All DBs
Position
2071878..2073941
Genome browser
AA seq
687 aa
AA seq
DB search
MTRGGLPKRQRLIGLWLLLSGISLLGGAVFAAWLDAQLAPSGATRVALWLGSFSGGATIF
LAGLLLERMLFTPLRHLQVQLARLVANPDARDEYPPEGWLKGLGPDLKRVRESWREDRSR
LATAHTEGARSAAKIRQELETLLQVLETPLLLCDHHRRVMLFNQAAEDFFADNTGLGLGK
RLEALLPVASLQQAISQLPNDGAPRELLSPCDNRWLKVILRRVPGSDGETLLTFSDATAS
WSNEMGVRAELADMLTPLRQHTASLTSAADALIQLRHQGDLETSSLRQRLERVIQEEGAT
LGDNVAQIGQLLDAMQHQGERLTPMWSNDFWQALDERLDPEHRLITPVGMPAWFKGDAPA
LIALFDSLVKHLNAHLPDSGFEGEMCLGNKRVYLDLIWQGKALPEHELAEWRQQPLPSLP
LSPIVSDVLRQHASDIWSLTDDDGVHARLRLPLPAMDRVGAPRETAPPRPEFHDFGIADL
PPPDEALASRSLRSLDVVAFDTETTGLELRRGDTVISLGACRVVNARLLASDVFDQKVDP
KRPIPLASTAIHGLTDADVAGAPPLDIVLSRFRDYAGEAVLLAHNAAFDLLAISHQGVTF
DLPVIDTLLISRALDEALDGHDLDSLAERYDLAFPPGTRHTALGDARVTAELWLALLPRL
EARGINTLEQLLALQANAFDREDASAS
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgacaagaggtgggctgcccaaacgccagcgattgattggcctgtggcttctgcttagc
ggcatcagcctgctgggcggggctgtctttgctgcgtggctggatgcccaattggcgcca
agtggggcgacgcgagtcgccttgtggctgggcagtttctctggcggcgccacgattttc
ctggcggggttgctgcttgaacgcatgctgttcacccccttgcgccacctgcaggtccaa
ttggcacgcctggtggccaaccccgatgcacgcgatgaatacccgcccgaaggctggcta
aaaggcttggggccagaccttaagcgggtccgcgagagctggcgtgaagaccgcagtcgc
ctggccacggcgcataccgaaggcgcgcgcagcgccgccaaaattcgccaggagcttgaa
accctgttgcaggtgctcgaaacacctctcctgctatgtgaccatcatcgtcgtgtgatg
ctgttcaatcaggcagccgaagactttttcgccgataataccggcctcggcctgggcaaa
cgcctggaagcgctactgccggtagcgagcttgcagcaggcgatcagccagctacccaac
gatggcgccccccgtgagctgctttctccttgtgacaaccgctggctaaaggtcatttta
cgccgcgtcccgggtagcgatggcgaaacgctgttgacgttcagtgacgcgaccgcctcc
tggtcgaacgaaatgggggtaagagcggagcttgctgacatgttgacgccccttcgccag
cataccgcgagcctgaccagtgccgcggacgcgctgatccagcttcgtcatcaaggcgac
ctggaaacctcatcgctacgccagcgtcttgaacgcgtcatccaggaggaaggcgccaca
cttggcgacaacgttgcccaaatcggccagctactggatgccatgcagcatcagggcgaa
cgcctgacccccatgtggtcaaacgacttctggcaagccctggacgaacgccttgacccc
gagcaccgcctgattacccccgtcggcatgcctgcctggttcaagggcgacgcgccggct
ctgattgcgctgtttgattcgctggtcaagcatctcaatgcgcacctgcccgacagcggc
tttgaaggcgagatgtgcctgggtaataagcgtgtctatctagaccttatctggcagggc
aaggcgttacccgagcatgagctggccgagtggcggcaacaaccgctgccttctctgccg
ctgagccccatcgtttccgacgtactgcgccagcatgccagcgatatctggagcctgacc
gacgatgatggcgttcatgcccgcctgcgccttccactacccgccatggaccgtgtaggc
gccccacgagaaaccgccccgccgcgccccgaattccatgactttgggattgccgacctg
ccaccgccggatgaagctctcgccagccgctcgctgcgcagcctggacgtggtggcattt
gataccgaaaccaccgggcttgaactgcgccgaggggataccgtgatcagccttggggcc
tgccgcgtggttaacgcacgcctgctggcaagcgacgtcttcgatcaaaaagtggatccc
aagcggcctattccgctggccagtaccgccattcacggccttaccgatgccgatgtggcc
ggcgcgccccccctggatattgtgcttagccgttttcgcgactatgccggtgaagcggta
ctgctggcccataatgccgcttttgacttactcgccatcagtcatcaaggggtgaccttt
gatctccccgtgatcgacaccctcctcatctcgcgcgcactggacgaagcgctggatgga
cacgacctggatagcctcgccgagcgctacgacctggccttcccgcccggcacacgtcac
acggcgttgggtgatgcgcgcgtcaccgccgaactctggcttgccctgctaccacgcctg
gaagcccgaggcatcaatactctggagcaactacttgccctccaggccaatgccttcgac
cgagaggatgccagcgcctcatga
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