Halomonas sp. A40-4: IT895_10515
Help
Entry
IT895_10515 CDS
T11047
Name
(GenBank) TRAM domain-containing protein
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
hspe Halomonas sp. A40-4
Brite
KEGG Orthology (KO) [BR:
hspe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hspe03009
]
IT895_10515
Enzymes [BR:
hspe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
IT895_10515
Ribosome biogenesis [BR:
hspe03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IT895_10515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
TRM5-TYW2_MTfase
Methyltransf_25
DNA_methylase
Methyltransf_11
Methyltr_RsmB-F
SAM_MT
Cons_hypoth95
Methyltransf_31
RrnaAD
Motif
Other DBs
NCBI-ProteinID:
QPL44659
UniProt:
A0A7T0RBM5
LinkDB
All DBs
Position
complement(2249552..2250952)
Genome browser
AA seq
466 aa
AA seq
DB search
MAMLGKRRPPRPASGHSGLARQPTAKPSSQSPQESNTLVIERLAHDGRGVAHNAEGKTVF
IDQALPGEYVDVAVHQTRKRYDEAHVKNLLTPSAQRVAPPCPHFSHCGGCDLQHMTVAAQ
REHKREVVRDLMARQGIELGEIESLHDDVQGYRRRARLGVKVDADGHPRLGFRAAHSHRL
IDIERCVVLVDGLQALIAPLRDLLATLDAPRQVGHIELLATASQRVVLVRQLKANPLDAE
RWQAFADHHQVALGTWLGRESPRLHWYGAAPVLEETLDRPDATPLTLHFAPGDFLQVNAA
VNQQMVNTAMHWLALSPGQRTMDLFAGIGNFSLPMAAAGACVHAVEGSPAMVERLADNAH
RNRLDVTGQQADLSDPDTVASLLKAEGLEALVLDPPRSGAEVICQALARNPVARIMYISC
DPATLARDAAHLVHAGYRINRVAVADMFMHTAHMETLMLFEHTKCA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggccatgctgggaaaacggcgaccgccgcgtcccgcgtcggggcattccgggctggca
cgccaacccacggcgaaaccctcgagccagtcgccgcaagagtcaaacacgctggtgata
gagcgcctggcgcatgacggccggggggtggctcacaacgccgagggcaaaacggttttt
atcgaccaggcgctacccggcgagtacgttgacgtggcggttcaccagacccgcaagcgc
tacgacgaagcgcacgtcaaaaatctgctgaccccctcggcgcagcgtgttgcgccgccg
tgcccgcatttcagccattgcggcggctgcgatcttcagcacatgacagtggcggcgcag
cgcgagcataaaagggaggtggttcgcgatttaatggcccgccagggaatcgaactgggt
gagatcgaatcgttgcacgacgatgttcagggctaccgtcggcgggcacgcctgggcgtt
aaggtcgatgctgacggccatccacggctgggctttcgagcggcccattctcacagactg
atcgacatcgaacgctgtgtggtgctggtcgatgggttgcaagcgctgattgctcccttg
cgcgatctgctggcaacgctggatgccccgcgtcaggttgggcatatcgaactgctggcg
accgccagccagcgagtcgttctggttcgtcaattgaaagccaatccattggacgccgag
cgctggcaggcgtttgctgaccaccaccaagtcgctttaggcacctggttagggcgtgag
agcccgagactgcattggtatggtgcagcgccggtactggaagagaccctcgataggccg
gatgcgacgccgttgactcttcattttgcgcctggtgactttttacaagtcaacgccgcc
gtgaatcagcagatggtcaatactgccatgcattggctggcgctttcgcccggccaacga
acgatggacctgttcgccggtatcggtaacttcagcctgccaatggcagcggccggagct
tgtgtacatgccgtggaaggcagtcctgccatggtcgagcggctggcggataatgcccat
cgaaatcgacttgatgtgacgggccaacaggccgatctcagcgacccggataccgtcgcc
tcactgctcaaggccgaaggtctggaggcactggtgcttgacccgccacgtagtggggcc
gaggtcatttgccaagcactggcgcgcaatccggttgccaggataatgtatatttcctgt
gatcccgccacgcttgcccgtgatgcggcacatcttgtgcatgcaggttaccgcatcaac
cgcgtcgcagtggccgacatgttcatgcacactgcacatatggaaacgctgatgctgttt
gaacacactaagtgtgcctaa
DBGET
integrated database retrieval system
