Halomonas sp. A40-4: IT895_10540
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Entry
IT895_10540 CDS
T11047
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
hspe Halomonas sp. A40-4
Pathway
hspe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hspe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IT895_10540 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hspe03400
]
IT895_10540 (recO)
DNA repair and recombination proteins [BR:
hspe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IT895_10540 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
IT895_10540 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
QPL44664
LinkDB
All DBs
Position
complement(2255901..2256593)
Genome browser
AA seq
230 aa
AA seq
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MSAEPAFLLHRRPYRETSALVDLLTLHHGRIRAVAQGGQRPTSKSRQRLQPFTPLLVTWR
GERELKRLNLMESRGATALLAGEGLLCGFYANEIATRLLPLELPAGNVFAFYTALLEALP
MPAARALALRRYEWSLLEVLDATPRFCTPDGGALDPQAQYRFDAASRAFIPAAKGLDGRT
LRYIDQHDWQEPTLANALKAVMRAALAPHLGTTALRSRELMRDLAQRRQR
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggagccggccttcctgcttcaccgaaggccataccgcgaaaccagtgcgctg
gtggatctgttgacactccaccatgggcgtatccgagcggtcgcccagggcggtcagcga
cccacgtcaaaatcgcgccagcggcttcagccttttactcctcttctagtaacctggcga
ggcgaacgtgagctcaagcggctgaacctgatggaatcacggggagcgacagcgctgttg
gcgggcgagggcctgctttgtgggttttatgccaacgagattgcgactcgcctgctgccg
ctggaactgcccgcaggcaatgtctttgccttttacaccgccttgctggaggcgctgccg
atgcctgccgcccgtgcgctggcgctgcgccgttacgaatggtcgctgctggaggtcctg
gacgccacgccacgcttctgcacccctgacggtggcgcgctcgaccctcaggcccagtac
cgattcgatgccgccagccgggcgttcatcccggccgccaaagggctggacggtcgcacc
ctacgctatattgatcaacatgactggcaggaaccgacgcttgccaacgcgttgaaggcc
gtcatgcgcgccgcgctggcgccgcatctggggaccactgcattacgctcccgggaattg
atgcgcgatcttgcccagcgtcgccaacgttag
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