KEGG   Halomonas sp. A40-4: IT895_10550
Entry
IT895_10550       CDS       T11047                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
hspe  Halomonas sp. A40-4
Pathway
hspe03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:hspe00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    IT895_10550 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hspe03019]
    IT895_10550 (rnc)
   03009 Ribosome biogenesis [BR:hspe03009]
    IT895_10550 (rnc)
   03036 Chromosome and associated proteins [BR:hspe03036]
    IT895_10550 (rnc)
Enzymes [BR:hspe01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     IT895_10550 (rnc)
Messenger RNA biogenesis [BR:hspe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     IT895_10550 (rnc)
Ribosome biogenesis [BR:hspe03009]
 Eukaryotic type
  90S particles
   RNase
    IT895_10550 (rnc)
 Prokaryotic type
  rRNA processing factors
   IT895_10550 (rnc)
Chromosome and associated proteins [BR:hspe03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     IT895_10550 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM DSRM_2
Other DBs
NCBI-ProteinID: QPL44666
LinkDB
Position
complement(2257498..2258190)
AA seq 230 aa
MSTSLTAFCRRIGHTFGDITLIELAMTHRSYGGRNNERLEFLGDSIVNFVIAEALYERFP
QAREGQLSRLRARLVKGQTLAELAREMTFGECLRLGSGEMKSGGHRRESILADAVEAVIG
AIYLDAGMDAVRERVLSWYAERLAGISLQDTQKDPKTRLQEFLQSRQAALPRYEVVSVKG
EAHAQMFTVECYIDLLSEHTTGKGPSRRHAEQQAAEEALAHLEKRPGDNA
NT seq 693 nt   +upstreamnt  +downstreamnt
gtgagtacttcgttaaccgctttttgccgacgtattggccataccttcggcgatattacg
ctgatagagctggccatgacccaccgcagttacggcggccgcaataatgaacgcctggag
tttctgggcgattccatcgtcaatttcgtgattgcggaagccctttatgagcgttttccg
caggcccgtgaaggtcagctatcgcgcctgagggcgcgtctggttaaaggacaaacgctg
gcagagctggccagggaaatgacttttggtgaatgcttacggttaggctcaggcgaaatg
aaaagcggcgggcatcgccgggaatcgattctggcggatgcggtagaagcggtgatcggt
gccatctacctggatgcaggcatggatgccgttcgcgagcgtgtcctgtcatggtacgcc
gaacggctggcgggtatatcgctgcaggacacccagaaagaccctaaaacacggctgcag
gaatttcttcagtctcgccaggcggcgctaccccgctacgaagtggttagcgtcaagggg
gaggctcacgcccagatgttcactgtggaatgttacattgatctgctgagcgaacacaca
acgggcaaaggccccagccgtcgccacgcagaacagcaagccgctgaagaagcgctcgcc
caccttgaaaaacgtcctggagacaatgcatga

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