Halomonas sp. A40-4: IT895_10605
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Entry
IT895_10605 CDS
T11047
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
hspe Halomonas sp. A40-4
Pathway
hspe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hspe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IT895_10605 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hspe03400
]
IT895_10605 (xthA)
Enzymes [BR:
hspe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
IT895_10605 (xthA)
DNA repair and recombination proteins [BR:
hspe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
IT895_10605 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QPL44677
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All DBs
Position
2269929..2270762
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AA seq
277 aa
AA seq
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MRLVSFNINGIRARLHQLQALIESQKPDVIGLQETKVQDSEFPLADVEAMGYHVYYYGQK
GHYGVALLCRHKPEAVFYGFPDDDEDAQRRMIGVKLLADDGQPVTVWNGYFPQGENINHP
TKFPYKTRFYQQLARLLDEQHQPDERVAVMGDFNISPEDQDIGIGEANRKRWLREGKTSF
QPIEREWLEGIKAWGLSDSYRLCHPTDAEWFSWFDYRSKGFDREPKRGLRIDYILVTQPL
AECISAAGIDYVLRGMQRPSDHAPTWSDFSLSLTSAE
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttgtttctttcaatatcaacggcattcgcgcgcgacttcatcaactgcaggca
ttgatcgagtcgcaaaagcctgatgtgatcggccttcaagaaaccaaggtgcaggatagc
gagttccccctcgccgatgtggaggccatgggctatcacgtttactactacggccaaaaa
ggccactacggcgttgcgctgctgtgccgtcacaagcctgaggcggtcttttacggcttc
cccgacgatgacgaagacgcccagcgccgcatgatcggcgtcaaactcctcgccgacgat
ggtcagcccgtcaccgtgtggaacggctatttcccccagggggaaaatatcaaccacccc
accaagttcccgtacaagacccgcttttaccagcagctggcgcgcctgcttgacgagcag
caccaacccgacgagcgcgttgcggtaatgggggactttaacatttcacccgaggaccag
gatatcggcatcggcgaagccaaccgcaaacgctggctccgcgaaggcaaaaccagcttc
cagcccatcgaacgtgaatggctggaaggtatcaaggcgtggggattgagcgacagctac
cggctttgccaccccaccgatgccgagtggttcagctggttcgattatcgctcaaaaggc
tttgatcgcgaacccaaacgcgggctgcgcatcgactatattctggttacccagccgctg
gccgagtgtatcagcgccgcgggaatcgactatgtactgcgcggtatgcagcggccctct
gatcacgcccccacctggagcgacttctcgctcagcctgacgtcggcggaataa
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