Halomonas sp. A40-4: IT895_11575
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Entry
IT895_11575 CDS
T11047
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
hspe Halomonas sp. A40-4
Pathway
hspe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hspe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IT895_11575
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hspe02000
]
IT895_11575
Transporters [BR:
hspe02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
IT895_11575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
DUF4899
Flg_hook
DUF2018
YcgL
LTXXQ
Motif
Other DBs
NCBI-ProteinID:
QPL44847
LinkDB
All DBs
Position
complement(2474958..2475926)
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AA seq
322 aa
AA seq
DB search
MIKQLLSSAVLGAAILSSHSLMAADYTLQFGHLANEQNIWHQAAEKFKEEVETNSDGRIE
VQLYPNEQLGNEMDVINSIQLGTADMTITGESLQNWAPKAAMMAVPYAFRDAEHLHAAVN
GDIGAEIEAQITERTNLVPLAWFERGPRHLTSNRPIRTPDDLDGLRLRVPNVPLFVDTWQ
ALGARPTPMAFSEVFTALQQNTLEGQENPLSLIESASFNEVQDYINMTGHVRSWIYVVIG
RDQLENMPEELQQVVRDAAQTMQAYEAELFEEDQARLEEALEERGMEFVEVDVDAFAEKA
RPAVLEALTDEQRELFDAIQDL
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacaactactatctagtgcggttcttggggctgccattttaagcagtcattca
ctcatggcagcagattacacgttgcaatttggccacttggcaaatgaacagaacatctgg
caccaggctgccgaaaagttcaaagaggaagttgaaacgaattccgacggtcggattgaa
gtgcaactttaccccaatgagcaactcggtaacgaaatggatgtgatcaatagtatccaa
ctaggcacggcggatatgacgatcaccggtgaaagcttgcagaactgggcacctaaagcc
gcgatgatggcggtgccttacgctttccgagacgccgagcatctgcatgctgcggttaac
ggtgacattggcgccgaaattgaagcgcaaatcaccgagcgcactaacctggtacctctt
gcatggtttgagcgcggcccccgtcacttgacctccaatcggcctatccgtacgcctgac
gacctggatggcttgcgccttcgagtgcctaacgtgccgttgttcgttgatacgtggcaa
gcattgggagcgcgtcctacgcctatggcctttagtgaagtcttcaccgcgctccagcaa
aacaccctggaaggccaggaaaacccgcttagcttgattgaaagcgccagcttcaatgaa
gttcaggactacatcaacatgactggccatgtgcgcagttggatctatgtcgtgattgga
cgtgatcagttggaaaatatgcctgaagagcttcagcaggtggtgcgcgatgctgctcaa
acgatgcaagcgtacgaagctgaactgttcgaggaagaccaggcacgtctggaagaagcg
ctagaagagcgtggcatggagtttgttgaggtcgatgtcgatgcgtttgctgaaaaggca
cgtcctgccgtgcttgaagcactgacggatgaacagcgtgaactctttgacgctatccag
gacctgtaa
DBGET
integrated database retrieval system
