Halomonas sp. A40-4: IT895_13750
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Entry
IT895_13750 CDS
T11047
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
hspe Halomonas sp. A40-4
Brite
KEGG Orthology (KO) [BR:
hspe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hspe01002
]
IT895_13750
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hspe01011
]
IT895_13750
Peptidases and inhibitors [BR:
hspe01002
]
Cysteine peptidases
Family C82
IT895_13750
Peptidoglycan biosynthesis and degradation proteins [BR:
hspe01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
IT895_13750
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QPL45247
UniProt:
A0A7T0RCS2
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All DBs
Position
complement(2902886..2904517)
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AA seq
543 aa
AA seq
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MNERQPLRRWAMGVALCLSVGAVGGAGADTTPISDTLEVRVTASEQQLPIKSFYQYRDYQ
PVWTTAASVEALVAGLNALEQDGINPENYASASLMEAFERSQAGGESAQVTFELQASQAL
LQALDHLNRGQVNPRELSAQWDAERPSRGYSMGAVAKAVNQMDMAAAFDQARPDSSAYRR
LRAAFIDFQSRSLQSSVPYLDHREESLRPGDQHDDVLTLRRRLTHWGEPHLLAANPQAYP
LVDVDTPDQRHFDAPLAAAVKRFQRRHLLQEDGVVGEQTRRALNVPLSLRAKQLKVNLER
ARWMGSQPDNAPRVWVDLAGYRLHYNRPGGEHWQTRVVVGSPQRATPVIQSAITHLTLNP
SWTIPPTIMREDVLPRVREDVGYLAEENIQVVDFDGNPVNAEEVDWQQPGSVMLRQVAGS
ANPLGSIVVRFPNDHMIYLHDTPAQGLFQRHQRALSSGCVRVEGVTQFAQLLLEDTGSSA
QVASLVASSQSDRQLSLPRRVPIALHYLTAWPNAEGEVEFRPDIYGHDAAVESALSQPMQ
LSG
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcggcagccattaagacgatgggcgatgggggtggcgctttgcctgagcgta
ggtgcggtgggtggtgctggtgcagacacaacacccattagcgacacgctggaagtgcgt
gtgacggcgagtgaacaacagttgccgatcaaaagtttctatcaataccgcgattaccag
cctgtatggacgacggcggcaagcgtggaagcgcttgtggcaggtctcaatgcgcttgag
caggacggtataaaccctgagaactacgcgtcagcgtcgctcatggaggcgtttgagcgc
agccaggcaggtggggagtctgcccaggtgacgtttgagttgcaagcgagccaggcgctt
ttgcaggcgcttgatcatttgaatcgtggccaggtgaatccccgagagttaagtgctcaa
tgggatgctgagcggccatcgcgaggttactcgatgggggcggtggccaaggccgttaat
cagatggatatggcggcggcgtttgaccaggcacgtccggactcgtcggcgtaccgtcga
ctaagagctgcgtttattgatttccaatcgcggtcattgcagtcgagcgtgccttacctt
gatcatcgtgaagaatcgctcagacctggcgatcaacatgatgatgttttaacgttgcgt
cgtcgactgacgcactggggcgagccgcacctgctggcggctaacccgcaggcttatccg
ctggtagacgtcgacacccctgatcaaagacattttgatgcgccgctggcggcggccgtc
aaacgttttcaacggcgccatctgcttcaggaagatggcgtggtcggcgaacaaacccga
cgcgcgcttaacgtcccgctgtcattgcgggccaaacagctcaaggtgaaccttgagcgt
gcgcgctggatgggatctcagccggacaatgcgccaagggtgtgggtcgaccttgccggc
taccgcttgcattacaatcggccaggcggcgagcattggcagacccgcgtcgtggtaggt
tccccccagcgtgcaacgccggtgattcaatcggcgattactcatctaacgttaaatcca
agctggaccatcccgccgacgatcatgcgtgaggacgtattaccgcgtgttcgtgaggat
gtgggctatctagccgaggaaaatattcaggtggttgattttgacggtaacccggtgaat
gctgaggaggtcgattggcagcagccgggcagtgtcatgctgcgccaggtagcaggtagc
gcgaacccattggggagcatcgtcgtgcgctttcccaatgaccatatgatctatctgcac
gataccccagcccaggggctttttcagcggcatcagcgcgcgctcagctcaggctgcgtc
agggttgagggtgttacccagtttgcccagctgttgttagaggataccggcagttcggca
caggtggcgagcttggtggccagtagtcaaagcgatcggcagctcagcttgccgcgtcgc
gtgcccattgcgctgcattatttgacggcttggccgaatgctgagggcgaggtcgagttt
cggccggatatatacggccacgacgcagccgtggagtcggcacttagccaacccatgcag
ctatcgggttaa
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