Halomonas sp. A40-4: IT895_14580
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Entry
IT895_14580 CDS
T11047
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hspe Halomonas sp. A40-4
Brite
KEGG Orthology (KO) [BR:
hspe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hspe03016
]
IT895_14580
Enzymes [BR:
hspe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
IT895_14580
Transfer RNA biogenesis [BR:
hspe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IT895_14580
Prokaryotic type
IT895_14580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QPL45396
UniProt:
A0A7T0RD24
LinkDB
All DBs
Position
complement(3109345..3110379)
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AA seq
344 aa
AA seq
DB search
MPELPRWQRSLEAALGPPKPGRFRLAPDDFLVDEVLDFAPEGHGEHLWLNIEKRNLTTLE
VVKILSQRCDVAPRDVGYSGMKDRVAVTRQWLSVHLPGKEAPEGLMQALADGGISVLQHA
RHPRKLKRGVHRYNRFQLRLSGEAIETDDVSQRWQLLCEQGVPNYFGSQRFGPAGRNLQR
AEALLARGWRKRDDRHGILLSTARSFLFNELLSERIEKNQWQQPVNGDTLMLDGTQSVFN
VDQVDTTLCARADALDVHPTGPLWGVGNISQQAAGDYEAALLDRHPSLCEGLLRSGVRRG
QRALRVRLSEPQLNREAQSVVLSFALPRGSFATAVVSELIASPD
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccccgctggcagcgcagcctggaagcggcactcggtccgccaaaacct
ggcaggtttcgtctggcgccggatgactttttggtcgacgaggtgctggattttgccccg
gaggggcacggcgaacatctttggctgaacattgaaaagcgcaacctgacgaccctggag
gtcgttaaaatactcagtcagcgctgtgacgttgcaccccgtgacgttggctattcgggg
atgaaggaccgtgtcgcggtgactcgccaatggttgagcgtgcatttacccggcaaggaa
gcccctgaggggttgatgcaggccctcgccgatggcggcatcagcgttttgcagcatgcc
cgacacccgcgcaagctgaagcgtggcgtgcatcgttataaccgatttcaactgcggttg
agcggggaagcgatagagacagatgacgttagccagcgttggcagttgctatgcgagcag
ggcgtgcccaactactttgggtcgcaacgcttcgggccagcggggcgcaatctacagcgc
gcagaagcattgttggcgcgcggatggcgcaagcgtgacgatcgtcacggtattttgctg
tccaccgcccgcagctttctgttcaacgagttgcttagcgaaagaattgagaaaaaccag
tggcagcaaccagttaacggcgatacgctaatgcttgacggtacccagagcgtgttcaat
gttgaccaggtagacaccacgctttgcgcgcgtgccgatgcattggatgtgcatccgaca
ggtcccttgtggggcgtcggcaatatcagtcagcaggcagcgggtgactacgaggctgcg
ctgttggatcgtcatccgtcgctgtgcgagggcctgctgcgcagcggagtcaggcgcggc
cagcgggcattacgcgttcgtttgagcgagccacagctaaaccgcgaagcccagagcgtg
gtactctcattcgctctgcctcgcggcagtttcgccaccgcggtggtcagcgaattgatc
gcgtcaccggactga
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