Halomonas sp. A40-4: IT895_14895
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Entry
IT895_14895 CDS
T11047
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
hspe Halomonas sp. A40-4
Brite
KEGG Orthology (KO) [BR:
hspe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hspe03009
]
IT895_14895
Ribosome biogenesis [BR:
hspe03009
]
Prokaryotic type
ribosomal protein modification factors
IT895_14895
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
QPL45451
LinkDB
All DBs
Position
complement(3177766..3179949)
Genome browser
AA seq
727 aa
AA seq
DB search
MEIKVNYLDNLRLEAKFDDFNVISDQPIRYKGDGSAPGPFDYFLASSAMCAAYFVKVYCN
ARNIPTENIRLSQNNIVDPENRYKQIFKIQVELPEDISDKDREGMLRSIDRCTVKKVVQT
GPEFQIEVVENIDEDAQALLMGAPEGSSTYIEGKDLPLEQTIANMSALFADLGMKIEIAS
WRNIVPHVWSLHIRDAAAPMCFTNGKGATKESALCSALGEFIERLSCNFFYNDQFFGEEM
AGSDFVHYPNEKWFQPGPNDELPAEILDEHCLAIYNPEGELCGSNLIDTNSGREDRGIVS
LPCVRQSDGETVYFPSNLIENLFLSNGMSAGNTLVEAQVQCLSEIFERAVKREILEQELT
LPDVPQEVLAKYPSIVEGINALEAQGFPVLVKDASMGGQFPVMCVTLMNPRTGGVFASFG
AHPSFEVALERSLTELLQGRSFEGLNDLPLPTFNSQTVAEPNNFVEHFIDSVGVVSWRFF
SAKPDFEFSEWDFSGTNQEEAETLFGIFEELGAEVYMAVHEDLGAPVCRILVPGYSEVYP
IEDLIWDNTNKALDYREDILNLHRLDDDQLTDLVERLEDSQMDDHADIITLIGVEFDENT
VWGQLTILELKLLVYLALQRHEEALDCVQMFLQYNDNTVERGLFYQAVNAVLEIALDDEL
ELDDYLPNFQRMFGEATMEAVVGSVEGAVRFHGLTPTNMQLEGLERHQRLIESYKKLHAA
RAARAEV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagtcaactacctcgacaacctccgcctggaggccaagttcgacgacttt
aacgttatctccgaccagccgattcgctacaagggcgacggctcggcgcctggcccgttt
gactacttcctggcctcgtcggccatgtgcgcggcttacttcgtcaaggtgtactgcaac
gcgcggaacattcccaccgagaacattcgcctgtcgcaaaataacatcgtcgacccggaa
aatcgctataagcagattttcaagattcaggtcgaattgccggaggatatctccgacaag
gatcgcgagggcatgctgcgctccatcgatcgctgtacggtgaagaaagtcgtccagacc
ggccctgagtttcaaatcgaggtggtcgagaacatcgacgaggacgcccaggcgctgctg
atgggcgcgccggaaggcagcagtacctatattgaaggcaaggatctgccgctggagcag
accatcgctaatatgagcgcacttttcgctgacctgggcatgaagatcgagatcgcttcc
tggcgcaatattgtgccccacgtctggtcactgcacatccgcgatgcggctgctcccatg
tgctttaccaacggcaaaggcgccaccaaagagagtgcgctatgttcggcgttgggcgaa
tttatcgagcgtttgagctgcaatttcttctacaacgaccagttcttcggcgaagagatg
gcgggcagtgactttgttcactaccccaatgagaagtggttccagccgggccctaacgac
gaactgcctgcggagattctcgacgagcactgtctggcgatctacaacccggaaggcgag
ctgtgcggctctaatctgatcgataccaactcgggtcgcgaagaccgggggattgtctcg
ctgccttgtgtgcgtcagtccgatggcgagactgtttactttccgtccaacctgattgaa
aacctgttcctcagtaacggtatgagcgcgggcaataccctggtggaagcccaggtgcag
tgcctgtcggaaatcttcgagcgggcggtcaagcgtgaaatcctcgaacaggagttgacc
ctgccggatgtaccgcaggaggtgctggcgaagtaccccagcattgtcgaaggcattaac
gctttggaagcccaaggctttccggtgctggtcaaagatgcctccatgggcgggcagttc
ccggtgatgtgcgtcacgctgatgaacccgcgtaccggcggcgtttttgcctcctttggc
gcccacccaagctttgaagtggcgctggagcgcagcctgactgagttgctccagggccgc
agcttcgagggcttgaacgatctaccgctaccgaccttcaactcgcaaaccgtggccgag
ccgaacaacttcgttgagcactttatcgactcggtaggtgtggtttcctggcgtttcttt
agcgccaagcccgactttgagttcagcgagtgggacttctccggcaccaaccaggaagaa
gccgagacgctgtttggtatctttgaagagctgggtgccgaagtatatatggcggtgcac
gaggatctgggcgcgccggtttgccgcattttggtgccgggctactccgaggtttatccc
atcgaggatctgatctgggacaacaccaacaaggcgctggattaccgcgaggatattctc
aacctgcaccgcctggatgacgatcaactcaccgatctggtcgaacgactggaagacagc
cagatggacgatcacgccgatatcatcacgctgatcggcgtcgagtttgacgagaacacc
gtttgggggcagttgaccattctggagctgaaactgctggtctatctggcgcttcagcgt
catgaagaggcgctggactgcgtgcagatgttcctccagtacaacgacaacaccgtcgaa
cgtggtctgttctaccaggcagtgaacgcggtgctggaaatcgccctggatgacgagctg
gaactggatgattacctgcccaacttccagcgcatgttcggcgaagccaccatggaagcg
gtggtgggctcggtggaaggcgccgtgcgcttccatggcctaacgccgaccaacatgcag
ttggaaggccttgagcgccaccagcgcttgatcgaaagctataagaagcttcacgcggca
cgggcggcgagggcggaagtgtaa
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