Halomonas sp. A40-4: IT895_18215
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Entry
IT895_18215 CDS
T11047
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
hspe Halomonas sp. A40-4
Pathway
hspe00300
Lysine biosynthesis
hspe00470
D-Amino acid metabolism
hspe01100
Metabolic pathways
hspe01110
Biosynthesis of secondary metabolites
hspe01120
Microbial metabolism in diverse environments
hspe01230
Biosynthesis of amino acids
Module
hspe_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hspe00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IT895_18215 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IT895_18215 (dapF)
Enzymes [BR:
hspe01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
IT895_18215 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Draxin
Motif
Other DBs
NCBI-ProteinID:
QPL46056
UniProt:
A0A7T0REA4
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All DBs
Position
complement(3933028..3933861)
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AA seq
277 aa
AA seq
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MLLHFTKMHGLGNDFMVVDLVTQRARLRDEQIRQLADRRFGIGFDQLLIVEPPRDPDMDF
RYRIYNADGSEVENCGNGARCFARFVREQRLTHKHEIRVETAGGPLVLNVQHDGLVRVDM
GQPRFNPAAVPFDAPGDQPLHDVEVDGETLQLGVVSMGNPHAVLQVDDVDTAPVARLGPL
LEAHPRFPKRVNVGFMQVLSASEIRLRVFERGSGETLACGTGACAAVASGIRQGLLKSPV
RVHLLGGELSVEWSSPESPLIMVGPATHVFDGRVAIY
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgcacttcaccaaaatgcacggcctcggcaacgactttatggtggtcgacctg
gtcacccagcgcgcccgcctgcgcgacgagcaaatacgccaactggcggatcggcgtttt
ggcatcggttttgaccaactgctgatcgtggagccgccccgcgaccctgatatggacttt
cgctaccggatttacaacgctgatggcagcgaagtcgaaaactgcggtaatggggcgcgc
tgctttgcgcgctttgtccgtgaacagcgtctgacccacaagcacgaaattcgtgttgaa
accgctggcggaccgctggtgttgaatgttcagcacgacggcctggtgcgtgtcgacatg
gggcagccgcgctttaatccggcagccgtgccgttcgacgccccgggcgaccagccgctg
cacgatgtcgaggtggatggtgaaacgctgcaactgggtgtggtgtcgatgggcaacccc
catgcggtgcttcaggtcgatgacgttgataccgctcccgtcgcgcgtttgggtccgctg
ctcgaagcgcatccgcgctttcccaagcgtgtgaacgtggggttcatgcaggtgctgtcg
gcaagcgaaatccggctacgggtatttgaacgcggtagtggcgaaacgctagcctgtggt
accggggcctgcgccgccgttgccagtggtatccgccaggggctgttaaaaagcccggtg
cgcgtccatttactcggcggcgaattgagtgtcgagtggtcgtcacccgagtcaccgctg
atcatggtggggccggcgacgcatgtcttcgacggccgggtagcgatttactag
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