Halomonas sp. A40-4: IT895_18220
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Entry
IT895_18220 CDS
T11047
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hspe Halomonas sp. A40-4
Pathway
hspe00300
Lysine biosynthesis
hspe00470
D-Amino acid metabolism
hspe01100
Metabolic pathways
hspe01110
Biosynthesis of secondary metabolites
hspe01120
Microbial metabolism in diverse environments
hspe01230
Biosynthesis of amino acids
Module
hspe_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hspe00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IT895_18220 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IT895_18220 (lysA)
Enzymes [BR:
hspe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
IT895_18220 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QPL46057
LinkDB
All DBs
Position
complement(3933861..3935132)
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AA seq
423 aa
AA seq
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MDHFNDRDGLLFAEDVPLDRIAETYGTPCYVYSKATLTRHFRAYTEALGGHPHLICYAVK
ANSNLAVLGLLAKLGAGFDIVSVGELERVLKAGGDPDKVVFSGVAKQPHEMARALEVGIK
CFNVESRPELERLNAVAGELGKMAPVSLRVNPDVDAGTHPYISTGLKDNKFGIPVDDALT
VYELAASLPNLQVKGLDCHIGSQLTETAPFLDALERLLVLMERLRERGIEIDHLDLGGGL
GVPYRDETPPHPFDYASQLLSRLSRWEGGEQLTLLFEPGRSIAANAGIMLTRVEFLKPGE
TKNFAIVDAAMNDLIRPALYQAWQAIVPVDTRSARETSIYDVVGPVCETGDFLGQERELA
IAAGDLLAVRSAGAYGFVMASNYNSRPRPAEVMVDGERCHLVRARETLESLWSGEALLPE
GGC
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggatcattttaacgaccgtgacggcctgctttttgctgaagatgtcccgcttgaccgt
atcgccgagacatacggcacgccttgttatgtctattcaaaggcaacactgacgcgccat
ttccgcgcctacaccgaagcgttgggcggccatccacacctgatttgctacgcggtaaag
gcaaactccaatctcgccgtgctggggctgttggccaagctgggagcgggttttgacatt
gtgtcggtgggcgagcttgagcgcgtgctcaaggcgggcggtgacccggacaaggtcgtg
ttttccggcgtggccaagcagccccatgaaatggcccgggcacttgaagtgggcatcaaa
tgtttcaacgtcgagtcacgccccgagctcgagcggctgaacgccgtggcgggtgagctt
ggcaagatggccccggtgtcgctgcgggtcaatcccgatgtggacgcgggtacccaccca
tacatttccactggccttaaggacaacaagttcggcattcccgtcgacgatgccctgacg
gtgtacgaactggccgcaagtctgcccaacctgcaggtcaagggcctggattgccatatt
ggttcgcagcttaccgaaaccgcgccgtttctggatgcgctggagcgtttactggtgctc
atggagcgcctgcgcgagcgtggcatcgagatcgaccatctggacctgggcggcggcctt
ggcgtgccctaccgggatgaaaccccgccgcacccgtttgactacgcaagccagctactc
tcgcgcctgtcgcgttgggaaggcggcgagcaactgacgctgctgttcgaacccggtcgt
tcgattgccgccaatgcggggatcatgctcacccgtgtggagtttttaaaacctggcgaa
accaagaactttgccatcgtggatgccgccatgaacgatctgatacgcccggcgttgtat
caggcatggcaggccattgtcccggtggatacgcgatcagcgcgcgaaacctcgatctac
gatgtggtggggccggtctgtgaaacgggcgactttttgggtcaagaacgcgagttggcg
attgccgcgggcgacctgctggccgtgcggtccgccggcgcctatgggtttgtcatggcc
tccaactacaacagccgcccgcgccccgctgaagtgatggtagacggcgaacgttgtcat
ctggtccgcgcccgtgaaacgctggaaagcctgtggtccggtgaagccttgctgcccgaa
ggaggctgctaa
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