Heyndrickxia sporothermodurans: JGZ69_11870
Help
Entry
JGZ69_11870 CDS
T10218
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
hspo Heyndrickxia sporothermodurans
Pathway
hspo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hspo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JGZ69_11870 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hspo03400
]
JGZ69_11870 (uvrB)
DNA repair and recombination proteins [BR:
hspo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JGZ69_11870 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JGZ69_11870 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_19
AAA_30
AAA_7
AAA_22
UFL1
P-loop_SecA
UvrD-helicase
AAA
TrwB_AAD_bind
Phage_Mu_Gp48
PIF1
HEM4
AAA_25
DUF87
Motif
Other DBs
NCBI-ProteinID:
QQX23630
UniProt:
A0AB37H3L0
LinkDB
All DBs
Position
2312015..2313991
Genome browser
AA seq
658 aa
AA seq
DB search
MNEQFELVSKYQPQGDQPEAIRKIVEGIKNGKKHQTLLGATGTGKTFTISNVIKEVKKPT
LIIAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYFQPEAYVPQTDTYIEKDSSINDEID
KLRHSATSSLFEREDVIIIASVSCIYGLGNPEEYREMVLSLRTGMEVERNQLLRKLVDIQ
FSRNDIDFQRGTFRVRGDVVEIFPASKDEHCIRVEFFGDEIDRIREVDALTGEIIGDRDH
VAIFPASHFVTREEKMRVAIANIEKELEERLKELRDNNRLLEAQRLEQRTNYDLEMMREM
GFCSGIENYSRHLTLRPSGSTPYTLLDYFPEDFLIVVDESHVTIPQIRGMYNGDQARKQV
LVEHGFRLPSALDNRPLKFEEFESHVNQIVYVSATPGPYEIEHTPEMVEQIIRPTGLLDP
TIEVRPIEGQIDDLLGEINERVERNERVLITTLTKKMSEDLTDYLKEVGIKVQYLHSEVK
TLERIEVIRDLRLGKYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNANGQVIMYADKMTDSMKKAIEETKRRRTVQEKYNSKHGITPQTIQKDIRDVIRATR
AAEDQEEYVATTPTKLTKKEREKLIQQLEHDMKEAAKALDFERAAQLRDTLLELKAEG
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgaacaatttgagctcgtttcgaagtatcagccgcaaggagatcaacccgaagct
attcgaaaaattgttgaaggcataaaaaatggaaagaaacatcaaaccttactaggggca
acagggacaggtaaaacttttaccatctccaacgtaataaaggaagtaaaaaagccgact
ttaattattgctcacaataaaacattagcgggacaattatacagtgagtttaaagaattt
tttccaaataatgctgttgaatactttgtcagttattatgattatttccagcccgaggcg
tatgtacctcaaacagacacatatatcgaaaaagattcgagtattaatgatgagattgat
aagttaagacactcggcaacgtcatctttatttgaacgtgaagatgtaatcattattgcc
agtgtttcatgtatttacggtttgggtaatccggaagaataccgagaaatggtcctttct
ctacgaactggaatggaagttgaacgaaaccagcttcttcgcaaacttgtagacatacag
ttttctagaaatgacattgattttcaacggggtacatttcgagtaagaggcgatgttgtt
gaaattttcccagcttcaaaggatgaacattgtattcgtgttgaattttttggtgatgaa
atagatcggattcgtgaagttgatgctctaacaggtgaaattattggtgatcgtgatcat
gtcgctattttcccggcttcccacttcgtaacacgagaagaaaaaatgcgggtagcgatt
gcaaatattgaaaaggaattagaagaacgtctaaaggaactacgtgataataatcgttta
cttgaggcacagaggctagagcaaaggactaattatgatttagaaatgatgcgtgagatg
ggattctgctcaggtatagaaaattattcgcgtcacttaacattacgcccttcaggttcc
acaccgtatacactactagactatttccctgaagactttttaattgttgtcgatgaatct
catgtcacgattccccaaatacgcggaatgtataatggtgaccaggcacgcaagcaagtt
cttgtggagcatggatttcgcttgccatcagctttggataaccgaccattaaaatttgaa
gaattcgaatcacatgtgaatcaaatcgtttacgtatctgcaacaccaggcccgtatgaa
atcgagcatactccagaaatggttgaacaaattattcgtccgactggcctacttgatcca
acaattgaagttcgcccaattgaaggacaaattgatgacttgcttggtgaaataaatgaa
agagtagaacgcaatgaaagggttcttattactacgttaacgaaaaaaatgtcagaagac
ttaacggattatttaaaggaagtcggtataaaagtacaatatttacactcggaagtgaag
acattagaaagaattgaagttattcgggatctacgtcttggaaaatacgatgtgttagtt
ggaattaacctgttgagggaaggtttagatattccagaagtatcactagttgctattctt
gatgcagataaagaaggattcttgcgttctgaacgttcactgattcagacgatcggccgt
gctgcgcgtaatgcgaatggccaagtcattatgtatgcggataagatgacggattcaatg
aagaaggcgattgaagaaacaaagcgtcgccgcacagttcaagaaaaatataattcaaaa
catgggattacccctcaaacgatacaaaaggatatccgtgatgtgatccgggcgactcgt
gcagcagaagaccaagaagaatatgttgcaacaacaccaacgaaattaacgaaaaaagaa
cgagaaaaattaatccaacaattagaacatgatatgaaagaagctgcgaaggcgctcgac
tttgaacgtgccgcacagcttcgtgatacattattagaattgaaagcggaaggatga
DBGET
integrated database retrieval system
