Heyndrickxia sporothermodurans: JGZ69_15770
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Entry
JGZ69_15770 CDS
T10218
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
hspo Heyndrickxia sporothermodurans
Pathway
hspo03030
DNA replication
hspo03430
Mismatch repair
hspo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hspo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JGZ69_15770 (holA)
03430 Mismatch repair
JGZ69_15770 (holA)
03440 Homologous recombination
JGZ69_15770 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hspo03032
]
JGZ69_15770 (holA)
03400 DNA repair and recombination proteins [BR:
hspo03400
]
JGZ69_15770 (holA)
Enzymes [BR:
hspo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JGZ69_15770 (holA)
DNA replication proteins [BR:
hspo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JGZ69_15770 (holA)
DNA repair and recombination proteins [BR:
hspo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JGZ69_15770 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
HTH_37
TMIE
Motif
Other DBs
NCBI-ProteinID:
QQX24258
UniProt:
A0AB37HGW6
LinkDB
All DBs
Position
3077873..3078892
Genome browser
AA seq
339 aa
AA seq
DB search
MIDLWKQIEKKQFSPIYLLYGIESYLINETKQKLVNNVLTDEEMDFNLANYDLEETSIEV
ALEDAETFPFMGEKRLIFLHNAFFLTAEKGKQRVEHNIQKLEEYIQNPPSYTVLVIIAPY
EKLDERKKITKQLKKQAALLEAKKLNEMDLKKWVFQKVAENGVQIDDNAVDLLITLAGTN
LMMLSAEIDKLSLFVGVSNAISSETVENLTSRSLEQNIFSLVDKVVHRKINEALRIYYDL
LKQNEEPIKILSILANQFRLLYQTKELQRRGYGQQQMASYLKVHPFRIKLAAGQAKLFSE
EELKRIMLLCADSDYQMKTSGMNKVMITEMLLFKLSKSA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgattgacctatggaaacagattgagaaaaagcaattttcaccgatatatctattatat
ggaatagaaagctatttaatcaatgagacaaaacaaaaattagtgaataatgtgttaaca
gatgaggaaatggactttaatttagctaattatgaccttgaggagacttctattgaggta
gcactagaagatgctgaaacgtttccatttatgggtgaaaaaagattaattttcttacat
aatgctttttttctaaccgctgaaaagggaaaacaacgcgtcgaacacaatattcaaaaa
ctggaagaatatatacaaaatccgccttcctataccgttttagttataattgctccttat
gaaaaacttgatgaacgaaaaaaaataacgaaacaattaaagaaacaagcagccctgtta
gaagctaagaaattaaatgaaatggatctaaaaaaatgggtgttccaaaaagtggcggaa
aatggagttcaaatagatgataatgctgtagatttattaataactttagcgggtacaaat
ttgatgatgctttcagctgaaattgataagctctcactatttgtaggtgtttcaaatgct
attagtagtgaaacagtagaaaatcttacatcaagatcattagaacaaaatattttttcc
ttagtagataaagtagtccatcgaaaaataaatgaagcgctaagaatttactatgatctt
ttaaaacaaaatgaagaaccgattaaaatattatcaatactagccaatcaatttcgcctg
ctttaccaaacgaaggaactgcaaagaaggggatatggacagcagcaaatggcttcttat
ttaaaagttcatccttttcgaataaaacttgctgcaggacaagctaaattattttcagaa
gaagagttgaaaagaatcatgttattatgtgcggacagtgattaccaaatgaagacaagc
ggcatgaacaaggtaatgattaccgaaatgcttctttttaaactgagtaaaagtgcataa
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