Heyndrickxia sporothermodurans: JGZ69_20890
Help
Entry
JGZ69_20890 CDS
T10218
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hspo Heyndrickxia sporothermodurans
Pathway
hspo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hspo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JGZ69_20890 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hspo03019
]
JGZ69_20890 (pnp)
03016 Transfer RNA biogenesis [BR:
hspo03016
]
JGZ69_20890 (pnp)
Enzymes [BR:
hspo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
JGZ69_20890 (pnp)
Messenger RNA biogenesis [BR:
hspo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JGZ69_20890 (pnp)
Transfer RNA biogenesis [BR:
hspo03016
]
Prokaryotic type
tRNA degradation factors
JGZ69_20890 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
SPATA25
S1_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
QQX25130
UniProt:
A0A150KMT8
LinkDB
All DBs
Position
complement(4042552..4044669)
Genome browser
AA seq
705 aa
AA seq
DB search
MEHEKQVFTLDWAGRELTVEIGQLAKQANGAVLVRYGDTAVLSTATASKEPKSVDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFADGFRNEVQVVSIVMSV
DQDCPSEMAAMFGSSLSLSVSDIPFEGPIAGVIVGRIDNKFIINPTVSQMEKSDMHLTVA
GTKDAINMVEAGANEVPEEIMLEAIMFGHEEIKRLIQFQEEIVSKIGKEKMEVTLYEIDE
ELESEVRTMCEEDLIKAIQVQEKHAREEAIQEVKDQVIAKFEEREELAEDTIKQVKQILN
KLVKGEVRRLITEEKVRPDGRKIDEIRPLSSEVGLLSRTHGSGLFTRGQTQALSICTLGA
LGDVQILDGLGIEESKRFMHHYNFPQFSVGETGPMRGPGRREIGHGALGERALEPVIPNE
QQFPYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKSGEHYTIL
TDIQGMEDHLGDMDFKVAGTSKGVTALQMDIKIEGLSRQILEEALQQAKQGRMQILNHMM
STISNPRESLSAFAPKILTMTINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTVFIS
STDEEMNKKAKKIIEDIVREVEVGQIYLGKVKRIEKFGAFVEIFSGKDGLVHISEIAEER
VRKVEDVLKIGDEVLVKVLEIDNQGRVNLSRKSVLKEQKEKNENN
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggaacatgagaaacaagtatttactttagattgggccggccgtgaacttacggtagaa
attggtcaattagctaaacaagcaaacggagcagttttagtacgctatggagatacagcc
gttttaagtactgcaacggcttcgaaagaacctaaatcagttgatttttttccgttaact
gtaaattatgaagagcgtctttatgcagtaggaaagatacctggaggatttattaaaagg
gaagggagaccaagcgaaaaggcaattttagcaagccgcttaattgaccgcccaattcgt
ccgttatttgctgatggattcagaaatgaagttcaagtagtaagcattgttatgagtgtg
gatcaagactgcccttctgaaatggccgcaatgttcggatcatcactttcattatccgtc
tcagatattccatttgaaggaccaattgctggagtaatagtcggtcgaattgataataaa
tttatcattaatcctacagtatcacaaatggaaaaaagcgatatgcacttaactgtagcc
ggaactaaagatgcaatcaatatggttgaagcaggagcgaatgaagttcctgaagaaata
atgttagaagcaattatgtttggtcatgaagaaatcaaaagattaattcaattccaagaa
gagattgtttcaaaaattggaaaagaaaaaatggaagtcacattatacgaaattgacgaa
gaattagaatcagaagttcgtacgatgtgtgaagaagatttaattaaagccattcaagta
caagaaaagcatgcgagagaagaagctattcaagaggtaaaagatcaagtaattgctaaa
tttgaagaacgtgaagaattagcagaagatacaattaagcaagtaaaacaaattttaaat
aaattagtaaaaggtgaagtacgccgtttaattaccgaggaaaaagttcgtccagatgga
agaaaaatcgatgaaattcgtcctttatcttcagaggttggcttattatcaagaacacat
ggatctggtttattcacacgtggacaaacgcaagcattaagcatttgtactcttggcgca
ttaggtgatgttcaaatactggatgggctcggaatcgaagagtcaaaacgcttcatgcat
cattataattttccgcaatttagcgtaggtgaaacaggacctatgagaggacctggtcgc
cgtgaaattggacatggtgcacttggcgaacgggcgcttgaaccggttattccgaatgaa
caacaatttccttatacgattcgactagtttcggaagttttagaatccaacggttccact
tctcaagcaagtatttgtgccagtacactagcaatgatggatgcaggggtaccaattaaa
gcaccggttgcgggaattgcaatgggcttagttaaatctggtgaacattatacaatttta
acggatatccaaggcatggaagatcatttaggcgatatggattttaaagttgccggtact
tctaaaggtgtaacagcactgcaaatggatattaaaattgaaggtctttccagacaaatt
ttagaagaagcattacaacaagctaaacaaggccggatgcaaatattaaatcatatgatg
tcgacaatttctaatccacgtgaatcgttgtctgcatttgcaccaaaaattttaacaatg
acgattaatcctgataagataagagacgttatcggaccaagtggaaaacaaataaacaaa
atcattgaagaaactggcgttaaaattgatattgagcaagatggtacagtgttcatttct
tcaacggatgaagaaatgaataaaaaagcgaagaaaattatagaagatattgtccgagaa
gttgaagtaggacaaatttacttaggaaaagtaaaacggattgaaaaattcggcgctttt
gtcgaaatttttagtggtaaagatggacttgttcatatatcagaaattgctgaagaaaga
gtccgtaaagtagaggatgtattaaaaattggcgatgaagtcctagtcaaagttctcgaa
attgataaccaagggcgagtaaatctttcaagaaaatcggttttaaaagagcaaaaggaa
aaaaatgaaaataactag
DBGET
integrated database retrieval system
