Heyndrickxia sporothermodurans: JGZ69_21205
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Entry
JGZ69_21205 CDS
T10218
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hspo Heyndrickxia sporothermodurans
Brite
KEGG Orthology (KO) [BR:
hspo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hspo03032
]
JGZ69_21205 (topA)
03400 DNA repair and recombination proteins [BR:
hspo03400
]
JGZ69_21205 (topA)
Enzymes [BR:
hspo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JGZ69_21205 (topA)
DNA replication proteins [BR:
hspo03032
]
Prokaryotic type
DNA Topoisomerases
JGZ69_21205 (topA)
DNA repair and recombination proteins [BR:
hspo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JGZ69_21205 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
Zn_ribbon_ACC
Cys_rich_CPXG
DUF3970
Motif
Other DBs
NCBI-ProteinID:
QQX25187
UniProt:
A0AB37HIJ2
LinkDB
All DBs
Position
complement(4102735..4104810)
Genome browser
AA seq
691 aa
AA seq
DB search
MSEYLVIVESPAKAKTIERYLGKKYKVKASMGHIRDLPRSQMGVDTEHNFEPKYITIRGK
GPILKELKTAAKKAKKVYLAADPDREGEAIAWHLAHSLDVDIHSNCRVVFNEITKDAIKE
SFKHPRPINTDLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRLIIDREN
EIKNFTPEEYWTIVADFKKGKETFQGSFYGKNGKKVELKSEEEVKSILSQIKGKDFEITS
VSKKERKRNPAPPFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIDLGKEGTVGLITYMR
TDSTRISEVAQEEAANFIQQQYGKEYIRGEQRKEKKSSNTQDAHEAIRPTSTMREPSSLK
AFLSRDQLRLYKLIWERFVASQMAQAVMDTMSVDLNNGEIVFRANGSKLKFPGFMKVYVE
GTDDQSEEKDKFLPQMEKGDIVKSDVVDPKQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQKRGYVALENKRFIPTELGEIVLELIMEFFPEILDVEFTAKMEHNLDEIEEGK
VEWVKIIDDFYKGFYENLVKAESEMEKVEIKDEEAGEDCELCGNPMVFKMGRYGKFMACS
NFPDCRNTKPIVKEIGVKCPKCNEGNIIERKSKKKRIFYGCDRYPECDFLSWDKPIERKC
PKCEQLLVEKKLKKGVQVQCTNCDYKEKTVE
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtacttagtaatagtggaatcacctgcaaaggcaaagaccattgaacgatat
ttaggaaaaaaatataaagttaaggcatctatgggacatattagggatctaccaagaagt
caaatgggtgtcgacactgaacataactttgaaccgaaatatataacaattcgaggaaaa
ggacctattttaaaggaattgaagacagccgcaaaaaaagctaaaaaagtatacttggca
gctgaccctgatcgtgaaggggaagcaattgcgtggcatttggcacatagcctagatgta
gatatccattctaattgtcgggttgtttttaacgaaattacaaaagatgccattaaagaa
tcgtttaaacatcctcgcccgataaataccgaccttgttgatgctcaacaagcaagacgg
attttggatcgattagtcggatataacataagtcctttattgtggaagaaagtaaaaaag
ggattgagtgcaggccgtgtacaatccgtagctgtccgcttgatcattgaccgtgaaaat
gaaattaagaatttcacacctgaagaatattggacgatcgttgcagattttaaaaaagga
aaagaaacatttcaaggttccttttacggtaaaaatggaaaaaaagtagaactaaaatcg
gaggaggaagttaagtccattctttcgcaaattaaggggaaggatttcgaaattacttcc
gtatccaaaaaagagagaaaacgcaatccagctcctccatttaccacttcttctcttcaa
caagaagcggctagaaagttaaacttcagagcgaaaaagacaatgatgttagcacagcag
ctttatgaaggaatcgatttaggaaaagaaggaacggtcggtctcattacttatatgcga
acagactcaactcgaatatcagaggttgcacaagaagaggcggcaaattttattcaacag
cagtatggaaaagaatatattcgcggagagcaaaggaaggaaaagaaatcctccaatact
caggatgcccatgaagctattcgtccgacaagtacgatgagagaaccgagctcgcttaaa
gcatttttaagccgagatcagttaaggttatataaattaatttgggaacgttttgttgct
agtcaaatggcacaagcggttatggatacgatgagtgtcgatttaaataatggagagatt
gtttttagagcaaatggatcgaaattgaaatttccaggttttatgaaagtgtatgttgaa
ggaacggacgatcaatctgaagaaaaggataaatttcttcctcaaatggaaaaaggagat
atcgttaaatcagacgtggttgatccgaaacagcacttcacacagccacctcctagatat
acggaggcacgtttagtaaaaacacttgaggaactcggaattggccgaccgtctacatat
gctcctacattggatacaattcaaaaaagaggatatgtcgctctagagaataaaagattt
attccgactgaacttggcgaaattgttttagaacttataatggaatttttccctgaaata
ttagatgttgaatttactgcaaaaatggaacataatcttgatgaaattgaagaagggaaa
gtcgagtgggtaaaaatcattgatgatttttataaaggtttttatgaaaatctcgtaaag
gccgaatcagaaatggaaaaagttgaaataaaggatgaggaagccggcgaagattgtgaa
ttatgtggaaatccaatggttttcaaaatgggacgctatggtaaattcatggcatgcagc
aattttcctgattgtagaaatacaaaaccaatcgtcaaggaaataggggtcaaatgtcct
aaatgtaatgaaggaaatataattgaaagaaaaagtaagaagaaaagaatcttttacggt
tgtgatcgttatccagagtgtgatttcttatcttgggataagccgatcgaaagaaaatgt
ccgaaatgcgagcaacttctagttgaaaagaaattaaaaaaaggcgttcaagtacaatgt
acaaattgtgattacaaagaaaagacagtggagtaa
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