Hyla sarda (Sardinian treefrog): 130267793
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Entry
130267793 CDS
T11475
Symbol
MED16
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16 isoform X1
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
hsq
Hyla sarda (Sardinian treefrog)
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsq03021
]
130267793 (MED16)
Transcription machinery [BR:
hsq03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
130267793 (MED16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
Beta-prop_IFT140_1st
Beta-prop_WDR3_1st
ANAPC4_WD40
WD40_WDHD1_1st
DSE1_N
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_EML_2
Beta-prop_HPS5
WD40_Prp19
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
130267793
NCBI-ProteinID:
XP_056373965
LinkDB
All DBs
Position
1:295211983..295344918
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AA seq
828 aa
AA seq
DB search
MDVAYICEWDRKPRTNHCPSIPLVCAWSCRNLIAFTTDQRNEEEKDLTHMIHILDTEHPW
DVYSVNSGHQEVITSLEWDQSGSRLLSADADGRIKCWGMTDHLANSWQSLVGSEVDGDPI
VALSWLHNGVKLALHVEKSGVSSFGEKFSRVKFSPSLTLFGGKPMEGWIAVTVSGLVTVS
LLKPNGQVLTATESLCRLRCRVALADIAFTGGGNIVVATCDGSSTSPVQFYKVCVSVVSE
KCKIDTEILPSLFMRCTTDPARKDKFPAVTHLKFLARDMSEQVLLCASNQCSSVAECWSL
RKEGLPLNNLFQQLSPGVSDKQPMILKWRILSATNELERVSAVALPKLPISLTNTDIKVA
NDTKFYPGLGLALAFHDGNVHIVHRLSLQTMAILYGSSMRPSEEPSLKRQRSPTPCVHFK
ALQMSWTSLALVGLDTQGKLSMLRVSPSMGHALDMTTSLRHLLFLLEYCMVTGYDWWDIL
LHVQPNMVHNLVEKLHEEYTKQNAALQQVLSTRILSMKASLCKLSPSTITRVCDYHAKLF
LISISCTLKSLLRPHVLNTPDKSPGDRLIEICNKFPDTDIDKVMINLKTEEFVLDMPTLQ
SLQQLIQWIGDFVLYLLASLPNQGSSFRPGHSFLRDGSSLGTLREMMVMIRIWGLLKPSC
LPVYTATSDTQDSMSLLFRLLTRLWMCCRDENHPCEPDEALIDECCLLPSQFLIPNMDWL
PLGNGLISRLQSKLPLRLQFGKPPGAPSHASVQYEAYTRLPTQPKIDHLRRLHLGTFPTE
ACKSCTRCGCVTMLKSPNKAIAVKQWEQRWIKTCLCGGLWRKMPHTYS
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggacgttgcatacatctgtgagtgggacagaaaaccccggaccaaccactgcccctcc
atcccgctcgtctgtgcctggtcctgccgcaacctcatcgccttcaccaccgaccagcgc
aatgaggaagagaaagatcttacccacatgattcacatcttggacactgaacacccttgg
gatgtctactcagttaattctggccaccaggaagtcatcaccagcttggagtgggaccag
tctgggtcccgccttctttcagctgatgcagatggccggataaaatgttggggtatgact
gaccacttagcaaatagctggcaaagcttggtgggaagtgaagtggatggtgaccccatt
gttgctctttcatggcttcataatggtgtgaaattagcactccatgtggagaagtctgga
gtttctagttttggagaaaaattctcccgtgtaaagttttccccatccctcactttgttt
ggaggaaaacctatggaaggctggatcgctgttactgtcagtggattggtgactgtgtct
ttactgaagccaaatggacaagtgttgactgctacagaaagtctgtgccgccttcgatgc
agggtggcactagcagacattgcctttacaggtggtgggaacattgttgtagccacatgt
gatggaagcagcacatccccagtacagttctataaagtctgtgtatctgtcgtgagtgag
aaatgcaagatagacacagagatcctaccatcacttttcatgcgctgtaccacagatcct
gctcgcaaggacaagtttccagcagtgacacatctcaagttcctcgctcgagatatgtct
gagcaggtgcttctctgtgcctctaatcagtgctccagtgtagccgagtgttggtccctg
aggaaagaggggcttcctctgaacaatctcttccagcagttgtctcctggagttagtgat
aagcaaccgatgatcctgaagtggcgaatattatccgctaccaatgaactggagcgcgtc
tctgcggtggcattgcccaagctgccaatttctcttactaacacagacatcaaagttgca
aatgataccaagttctatccgggtttaggtcttgctctggcattccatgatggcaatgta
catattgtgcacaggctgtctctacagacaatggccatcctatatggctcctctatgcgc
ccatctgaagaacccagcctaaaacgtcagcgatcaccaaccccatgcgtacacttcaaa
gctttacagatgtcttggacttctcttgctttagttggcttggatacacagggaaagctc
agtatgctgagggtctccccttcaatgggacatgcccttgatatgaccacatcactacgc
catcttctgttccttcttgaatactgcatggtgacaggctatgactggtgggacattctg
cttcacgtacagccaaacatggtacacaatttggttgagaagctgcatgaggagtacacc
aaacagaatgctgctctgcaacaggtcctttctaccaggattctgtccatgaaagcatca
ctttgtaaactgtcgcctagcacaatcactcgtgtctgtgactaccatgccaaattgttc
ctcatctccattagctgcaccctgaagtctttacttcggccacatgttcttaacacacct
gacaaaagtccaggagaccggctcattgagatttgcaataagttccctgacacagatata
gataaggtcatgattaacttgaagacagaggagtttgtacttgacatgccaacccttcag
tctctacagcagcttatccagtggattggggattttgtgttgtatctactggcaagcctt
cctaaccagggctcctctttccgccctggacacagttttttgcgtgatggatcatcactg
ggtactctacgtgaaatgatggtgatgatccgaatttggggtcttctgaaacccagctgc
cttccagtgtacacagccacatcagatacacaggacagcatgtccctacttttccgtctg
ctcactcgtctctggatgtgctgccgtgatgaaaaccatccctgtgaaccagatgaggct
ttgatagatgagtgctgcttacttcccagccaattcctcatccctaacatggactggctt
cctcttggaaatggattaatcagccggctgcagagcaagctgcccctacgcctgcaattt
gggaaaccgccgggtgcacccagccatgcttctgtccagtatgaggcttatacaaggtta
cccacccaaccaaaaattgatcatctaagaagacttcatctaggaacatttcccactgaa
gcctgcaaatcttgcacacggtgtggttgtgtaacaatgctaaagtctccaaacaaagca
atagcagtgaagcaatgggagcaaagatggattaaaacctgcctatgtggaggactgtgg
agaaaaatgccccatacctactcatga
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