Hyla sarda (Sardinian treefrog): 130273427
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Entry
130273427 CDS
T11475
Symbol
TRIP13
Name
(RefSeq) pachytene checkpoint protein 2 homolog isoform X1
KO
K22399
pachytene checkpoint protein 2
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130273427 (TRIP13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsq03036
]
130273427 (TRIP13)
Chromosome and associated proteins [BR:
hsq03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
130273427 (TRIP13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
TRIP13_N
AAA
AAA_22
AAA_18
nSTAND3
Viral_helicase1
Cytidylate_kin
AAA_16
AAA_17
AAA_24
AAA_28
AAA_RNF213_4
AAA_5
AAA_14
IstB_IS21
RNA_helicase
AAA_6
ABC_tran
Motif
Other DBs
NCBI-GeneID:
130273427
NCBI-ProteinID:
XP_056376179
LinkDB
All DBs
Position
5:122128490..122467592
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AA seq
446 aa
AA seq
DB search
MDEAAGDLKQALPNFNDSLQVHVEVHQKSSSTAKTENVTAHVMQLLNRHSIVFGDYTWTE
FDDPLLVKNVNSVAVVDTELKLKDRKPIDLEKCNICIHVFQLNEEGPSAENLEDESEELV
AANHWLLPAVDFHRLWESLIYDSEIKSNLLDYVTTTLLFSDKNVDSNLIAWNRVVLLHGI
PLNNPIFTCHPLGPPGTGKTSLCKALAQKLSIRLSSRYRYGQLVEINSHSLFSKWFSESG
KLVTKMFQKIHELIDDKDALVFVLIDEVESLTAARSASSAGTEPSDAIRVVNAVLTQIDH
IRRYPNVVILTTSNITEKIDLAFVDRADIKQYIGPPSPAAIFNIYISCIEELMKRQIIYP
RQQLLTLRDLEMIGYVENNISKLSLLLNDISRKSEGLSGRVLRKLPFLAHALFIQSPTVT
VEKFLEALLLAVEKQFEERKTLMEST
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagcagcaggggatctaaaacaagctcttccaaatttcaatgattcacttcaa
gtacacgtagaagtacatcaaaaatccagcagcacagcaaagactgaaaatgtaacagct
catgtgatgcagttgttaaacagacacagcattgtatttggtgattatacttggacagaa
tttgatgaccctttattggtgaaaaatgtgaattctgtggctgttgtcgatactgagcta
aaactgaaggacagaaagcccattgatcttgaaaagtgcaatatatgtattcatgtattt
caactgaatgaagaaggaccaagtgcggaaaacttggaagatgaaagcgaagagcttgtg
gcggctaaccactggcttttacctgctgttgactttcatcggttgtgggaaagtctgata
tatgacagtgaaattaagtcaaatcttctagattatgttacaacaacactgctgttttct
gacaaaaatgttgacagcaatttgattgcatggaacagagtcgttcttttgcatggtata
ccccttaacaaccctatttttacgtgccatccattaggtccacctggtactgggaaaaca
tcactttgcaaagcattggctcaaaagctgtccatcaggttgtcaagcagatacagatat
ggtcaactcgtggagattaatagccacagtctcttctcaaaatggttttcagagagtggc
aagttagtaacaaagatgtttcagaagattcacgaactaatagatgacaaggatgcatta
gtgtttgtgctgatagatgaggttgaaagccttactgcagcacgaagtgcatctagtgca
ggcactgaaccttccgatgctattcgtgtagtgaatgctgttctcactcagatagaccac
ataagaaggtaccctaacgtagttatactgacaacttcgaacattactgagaaaatagat
ttggcctttgttgacagagcagatataaaacaatacattggccctccatcacctgctgca
attttcaacatttacatttcttgcatagaagaacttatgaagcgccagataatttatccc
agacagcaacttcttactttaagagacttggaaatgatcggctatgtggagaacaatata
tctaagcttagtttattgcttaatgacatttccagaaaaagtgagggtctcagtggtaga
gttcttcggaaacttccttttttggcacatgccctttttatacaatctcctacagttaca
gtagaaaaattccttgaagctcttttactggcagtggaaaagcagtttgaagaaagaaaa
acccttatggaaagtacctga
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