Hyla sarda (Sardinian treefrog): 130273882
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Entry
130273882 CDS
T11475
Symbol
CARMIL1
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
hsq Hyla sarda (Sardinian treefrog)
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsq04131
]
130273882 (CARMIL1)
Membrane trafficking [BR:
hsq04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
130273882 (CARMIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
LRR_Zer-1
IL34
Spectrin_5
Motif
Other DBs
NCBI-GeneID:
130273882
NCBI-ProteinID:
XP_056377301
LinkDB
All DBs
Position
5:235548777..235888426
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AA seq
1395 aa
AA seq
DB search
MTEDSSEVPKELQESIRDVIGRKIKIAVRKKVKLEIKGDKVDNKVLVLTSCRAFILTARV
PTKLELTFSYLEIQGIICSKPGHLVVETEKGNISLKMASSDDVNEVIGHIGTCLRKIFPG
MSPVKIMKKVTMEPSDRLANLQSMWDSQTVTEVGPCGGFSQMYACVCDWLSMPYREEVQW
DVDTIYLTQDTRELNLQDFSHLDHRDLIPIVAALEYNLWFTKLSSKDLKLSNDVCDQILR
VVSRSSRLEELVLENAGLRIDFAQKLSSALAYNPSSGLHTINLANNPLEDRGVSFLSTQF
AKLPKGLINLNLSKTSVSPKGVNSLSQSLSTTPLIASTLTHLDLSGNLLRGDDLSCLYTF
LATPNAIKYLDLSNTECSADAVCGALLRGCLQHLTTLNLSKTFFPHRKGKEVPPSFKQFF
SSTVALTHINFSGTKLSSEPLKALLLGLACNLNLKEVSLDLSNCELGHCLRSGGAQVLEG
CIAEIRNITSLDISDNGLESDLSTLVVWLSKNRSIRHLALGKNFNNMKSKNLTPVLDNLV
HMIQDEESPLQSLSLADSKLKTDVTIIINALGSNTSLTKVDISGNAMGDMGAKMLAKALQ
INTKLRTVIWDKNNITAQGFQDISVALEKNYTLRFMPIPINDASQALKTNPEKTEEALQK
IENYLLRNHETRKYLQEQAYRLQQSIVTSTTQHMIDRICVKVQDHLNSLRNCGIDFVLED
VKSAERVMRDAKNSKTLLPNLYHLGGAAWAGANNLPTPIQETLESMAGEVTRVVDDQLKQ
LLESMVDAAENLCPNVMKKAHIRQDLIQASTEKISIPRNFVKNVLLEQSGIDILNKISEV
KLTVASFLSDRIVDEILDALSSSHHKLADHLTKRGKPLPHQESMEIETVEERPTKRSVPT
IEELSEMERLEDLDTCMTLCCRSMTPKSKRKSIHSRMLRPVSRAFEMEFDLDKALEDVPI
HIEDPPYSSYKLDKRSSSVMAELPSEEGKKLEHFTKLRPKRMKKQQPSKFNQLGAEAASD
GDQNGLIARVDEGVDEFFSKKVTRLDSKKHSLKYGESQDINEGEEKKKRESRKSGFLNLI
KSRSKPERPQTVIVTEEPPSPKPSVKSPAPDFSKKDKVTDGNGAVSSSASAGSSGPSSST
ERSEEVKTPDSLEENLQLDEGGKAERSDSKSSPQSGRRYGVQVMGSGLLAEMKAKQEKRA
ANKKLGSDVGSKDTLEVEKADGSGAVPKFSMTRGDSTNSCPEKNVKCDVKSEGSVRSKSS
SSTPTSPKPPLQSSKPSLTARPSVPLKPRSGSRTEEIPESPSGPCSSKTTILPSVLKRGQ
SEKDRDGPSSPQPSSRPLADEASRPTTPSDSSLKKNHNQSPDGQELKSRSSSKDSHQRSK
SSDSGEEADKEFVFI
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagacagctcggaggtccccaaagaattacaggaaagcatccgggatgttatt
gggagaaaaattaagattgctgtgcggaagaaggtgaaacttgagatcaaaggagataaa
gttgacaacaaagtcctggtcctaacatcatgtcgtgcttttatattaactgctcgagtc
ccaacaaagctcgaacttacgttcagttatttggaaattcaaggcattatttgcagcaaa
ccaggccatctcgtagttgaaactgaaaaaggcaacatatccttgaagatggcttcttct
gatgatgtgaatgaagtcataggacacattggcacttgtcttcgaaagatattccctgga
atgtcgcctgtaaaaattatgaaaaaagttaccatggagccatccgacagacttgcaaat
ctgcaatccatgtgggatagccagactgtaacagaagtaggcccctgtggtgggttttca
cagatgtatgcgtgtgtttgtgactggctttcgatgccttacagagaagaagtacagtgg
gatgtagataccatatacttaacacaagatacaagggaactgaatttgcaggattttagt
catctagatcacagagatttgataccaattgtagctgccctagaatacaatctgtggttt
acaaaattatcatcaaaagacttgaaattgtccaatgatgtctgtgatcaaatcttacgg
gtagtgagcaggtccagtcgtttggaagaattggttttggaaaatgctgggctgagaatt
gattttgcacagaagctttccagtgctcttgcctacaatccaagctcaggactccataca
ataaaccttgcaaacaaccctcttgaggatagaggtgtgtcttttttaagtacacaattt
gccaaactacctaagggactgataaatttaaatttatcgaaaacctcagtatctcctaag
ggagtgaatagcctgtcccagtcgcttagtacaaccccattgattgcaagcacccttacc
caccttgatctctcagggaatttgctccgtggggatgacctttcatgtttgtatactttt
ttggcaacgccaaatgccattaagtacctggatttatcgaacactgagtgttcagcagat
gcggtatgtggtgcattactacgtggttgcctgcaacaccttactacacttaatctttcc
aagaccttctttccccacaggaaaggtaaagaagtgccaccatcttttaaacagttcttt
agcagcactgttgctttaacccacatcaacttttctggaactaagctctcctctgagcct
ctgaaagctctgttacttggcttggcatgtaaccttaacctaaaggaggtgtccctagat
ctcagtaactgtgagcttggtcactgtttaagatcaggtggagctcaagttctggaaggc
tgcatagcggaaattcgtaatatcaccagcttagatatatcagataatggtttggagtct
gacctctctactcttgtagtctggctcagtaagaacagatcaataagacacctggcattg
ggaaagaattttaacaacatgaaatccaaaaatctaacccctgttctggataacctggtt
catatgatacaagatgaagaatcgcccttgcagtcattgtctttagcagactccaaatta
aagacagatgtgacaatcattataaatgcccttggtagcaatacatcattgaccaaagta
gatatcagtggtaatgctatgggagatatgggggccaagatgttggccaaagcactgcag
atcaacaccaagctcaggactgtgatctgggacaagaacaacataacagcccaaggattc
caggatatatctgtagccctggaaaagaattatacattgaggttcatgcctatacctata
aacgatgcttctcaagcactgaagactaaccctgaaaaaacagaggaagccttacagaag
attgaaaactatttgctgaggaaccatgagacaagaaagtaccttcaagagcaggcctac
agactgcagcagagcattgtaaccagcactacacaacatatgattgaccgcatttgtgtc
aaagttcaagaccacctcaattcactaagaaactgtggcattgattttgtcctggaagat
gtcaagtctgccgagagagtcatgcgtgatgctaagaattcaaaaacacttttgccaaat
ttgtatcaccttgggggagcagcatgggccggagctaataacttaccaaccccaattcaa
gaaacattagagtcaatggcaggagaagtcactagagttgtagatgatcagttgaagcaa
cttctcgaatcaatggtggatgcagctgaaaacctttgtcctaatgtgatgaaaaaagct
catattcgtcaagatctcattcaagccagcactgagaagatctctattccacgcaacttt
gtaaaaaacgtcttactggagcaatctgggattgatattcttaacaaaataagtgaagtt
aaacttactgtagcatctttcttgtctgaccgcattgtcgatgaaatcttagatgcactt
tcaagcagccatcataaactggcagatcatctcaccaagcggggaaagccacttcctcat
caagaatctatggagatagagacagtagaggagaggccaaccaagcgttctgttcctact
attgaagaactctctgagatggagcgcttggaggacttggatacatgcatgactctctgc
tgtagaagtatgactcccaagtccaagagaaagagtattcatagcagaatgttgcgtcct
gtgtccagagcttttgaaatggaattcgacctggacaaggctcttgaagacgtcccaata
cacatagaagatcctccgtactcctcctacaagctggataagaggtcatccagtgtcatg
gcagagttgccatcagaagaagggaaaaagcttgagcactttactaaattacgaccaaag
agaatgaagaagcagcaacccagcaaattcaatcaacttggcgctgaagcggcttctgat
ggagaccaaaatggcctgatcgccagagtagatgaaggtgtagatgagttttttagcaag
aaggtgacaagacttgactcaaaaaaacattctctgaaatatggagaatctcaagatatt
aatgagggtgaagaaaaaaagaaacgggagtctagaaaaagtggctttctcaatcttatc
aaatctagatccaagccagaacgtccccagactgttatagtgactgaagaaccaccatct
cctaagccttcagttaaaagccctgcacctgactttagtaagaaggacaaggtgactgat
gggaatggagctgtaagttccagtgccagtgctggaagtagtggacccagcagtagtacc
gagagatcggaggaggtgaaaacaccagactctttagaggagaacttgcagcttgatgaa
ggtggcaaggctgagcggagtgacagcaaaagcagtccacagagtggaaggcgatatggc
gtccaagtgatggggagtggattgttagcagagatgaaggcaaagcaagaaaaaagagca
gcaaataagaaattgggcagtgatgttggcagtaaagacacactggaagttgagaaagca
gatggaagcggagcagttccaaaattctctatgactagaggtgattcaacaaattcctgt
ccagagaaaaacgtgaaatgtgatgtcaagtcagaaggcagtgtacgttccaaaagttct
tccagtacaccaaccagtcccaaaccaccacttcagtcatccaagccttccctaacagct
cgtccttcagttcctctgaaacccagaagtggttcccgcactgaagaaatccctgaatct
ccgtctgggccctgctcctctaaaaccacaattcttccttctgtgctaaagaggggtcaa
tcagagaaagacagggatggacccagcagcccgcagccttcttccaggccgcttgcagat
gaagcttcacgacctacaactccatctgactcatcactgaaaaagaatcacaaccagtct
ccagatgggcaagagctaaagtcaaggtcatcaagtaaagattctcaccagcgcagcaaa
tccagcgactctggagaggaggctgataaagaatttgtttttatataa
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