Hyla sarda (Sardinian treefrog): 130274362
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Entry
130274362 CDS
T11475
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130274362 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsq03021
]
130274362 (SMARCA2)
03036 Chromosome and associated proteins [BR:
hsq03036
]
130274362 (SMARCA2)
Transcription machinery [BR:
hsq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130274362 (SMARCA2)
Chromosome and associated proteins [BR:
hsq03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
130274362 (SMARCA2)
Chromatin remodeling factors
BAF complex
130274362 (SMARCA2)
PBAF complex
130274362 (SMARCA2)
GBAF(ncBAF) complex
130274362 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
130274362
NCBI-ProteinID:
XP_056378602
LinkDB
All DBs
Position
1:complement(360743936..361015969)
Genome browser
AA seq
1599 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPLSNM
GPSDYPPENMHQMHKQPMESMHDKGMSDEMHCATMKSSSMRPPHAGMGPPQSPMDQHSQG
YMSPHPSPLGAPEHVSSPMSGGGPTPPQIPPAQPGLMMQGDQQVINQPSRGPSAFSQVQL
HQLRAQILAYKMLARGQPLSENLQLAVQGKRTLPAIQQQQQQPPQAQQPPPQQPPSNYIR
PPSMGMHPMSVTPSGAGPAPGMAGHAATMALKPWGEGQTSELNMQSTPQKLSVPPPSGRP
SPAPPAAPPSVALPGPSVPQPTPGQPAPIVQLQQKQNRISPIQKPQGLDPVEILQEREYR
LQARIAHRIQELENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETA
LNSKAYKRNKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSV
TGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYL
LQQTDEYVANLTSLVWEHKQAQAAKEKKKKRRKKKMEENAEGMGSGLGPDGELIDESSQM
SDLPVKVIHTETGKVLLAPEAPKASQLETWLEMNPGYEVAPRSDSEGSSSEYEEEDDDDE
SSRLDSDEKKRITEEENNAKQIIENAKQDVDDEYGLQADARQSQSYYGVAHAITERVEKQ
STLLVNGSLKHYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGP
YLIIVPLSTLSNWQYEFDKWAPSVVKIAYKGTPAMRRALVPQLRSGKFNVLLTTYEYIIK
DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALL
NFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVE
SQLPEKVEYVIKCDMSALQKILYRHMQGKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKI
CNHPFIFQHIEESFAEHLGYANGIINGPDLYRTSGKFELLDRILPKLRATNHRVLLFCQM
TSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEEGSQYFIFLLSTRAGGLGLNL
QAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVD
QKVIQAGMFDQKSSSHERRAFLQAILEHEEQNESQKKDDLSGDNSQEGASQEEDEVPDDE
TLNQMIARHEEEFDLFMRMDLDRRREDARNPNRKPRLMEEDDLPSWIIKDDAEVERLTCE
EEEEKIFGRGSRQRRDVDYSDALTDKQWLRAIEDGNLEEMEEEVRLKKRKRRRNPDKDVV
VVVKDDGEKREKKRRGRPPAEKLSPNPPKLTKQMNVIVDTVINYKDSSGRQLSEVFIQLP
SRKELPEYYELIRKPVDFKKIKERIRNHKYRSISDLEKDVMLLCHNAQTFNLEGSQIYED
SIVLQSVFKSARQKIAKEDESEEESNEDEDEEDEDESESEAKSVKVKIKLNKKDDKNREK
GKGKKRQGRGKAKPVVSDYDSDEDQDENDQTEGSVSDDE
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atgtctactccaacagatccgggtgcaatgcctcacccggggccttctccaggtcctgga
ccttctccaggacctattttgggacctagcccaggaccagggccttccccggggtcagta
cacagtatgatgggcccaagcccaggaccacccagtgtgtcccatcctctttctaacatg
ggcccctcagattatccaccagagaacatgcatcagatgcacaagcagcctatggagagc
atgcacgataaaggaatgtctgatgaaatgcactgtgctaccatgaaaagctcaagtatg
aggccacctcatgctggtatgggccctccacagagtcctatggatcaacacagtcaaggg
tatatgtctcctcatccatcacccttgggggcccctgagcatgtatctagtcctatgtct
ggtggagggccaacaccaccacagatacctccagcacagcctggactcatgatgcaggga
gaccaacaagttattaaccagcccagtcggggtccctctgcttttagccaggttcagctt
caccaattgcgtgctcagattctggcttacaaaatgttggcaagaggacaaccattatca
gaaaatctgcaacttgctgtacaaggaaagcgaaccctacctgcaattcagcagcaacag
cagcagcccccacaagcacaacagccgccaccacagcagcccccttctaattacattcgc
ccaccaagcatgggaatgcacccaatgagtgtcactccttctggcgcaggacctgcacct
ggaatggctggacatgctgctacaatggctttaaaaccctggggagaaggacaaacttct
gaactcaatatgcaaagtaccccacagaaactttctgtaccaccaccaagcggcaggcca
tccccagcaccacctgcagcaccaccatctgttgctttgcctggtccatctgtcccacag
ccaacgcctggacagccagctccaattgttcaactccagcaaaaacagaaccgaataagt
ccaatccagaaaccccagggcttagatcctgttgaaatactgcaagaaagagaatacaga
cttcaggcccgtatcgcccatcggatccaggaactagaaaacttacctggctctttgcct
cccgatctgagaacaaaagcaacagtggagttaaaagccctaagactactaaacttccag
cgtcagctaagacaggaagttgtggcatgcatgcgccgggataccacacttgaaacagcc
ctcaattctaaggcttacaagagaaataagaggcaaaccctacgggaagctcgtatgact
gagaaacttgaaaaacaacagaaaattgaacaggaaagaaaacgaaggcaaaagcaccag
gaatatctcaatagtatattacaacatgctaaagactttaaagaataccacagatcggtc
actggcaaaatccagaaactttctaaagctgtggctacatggcacgcaaacactgaacga
gaacaaaagaaagaaactgaacgaattgagaaagaaagaatgagaagattgatggcagaa
gatgaagaaggataccgtaagcttattgaccagaaaaaggatcgccgtctggcctacctc
ctccaacagactgacgagtatgtcgctaatctgaccagtttggtttgggagcataagcaa
gctcaggccgccaaggagaaaaagaaaaagcgaagaaagaagaagatggaagaaaacgca
gaaggaatgggatctgggcttggtcctgatggagagctaatagatgaaagcagtcagatg
agcgatctacctgtaaaggttattcacactgagacaggaaaagtgctacttgccccagaa
gcaccaaaggctagtcaacttgagacttggcttgaaatgaacccgggatatgaagtagcc
ccaagatctgacagcgagggaagcagctcagaatatgaagaggaggatgacgatgatgag
tctagcagactggactccgatgaaaagaaacggattacagaagaggagaacaatgccaag
cagataattgagaatgcaaagcaagatgttgatgatgagtatggtttgcaggctgatgcc
cgccagtcacagtcatattatggagtggctcatgcaatcacagagcgggtggagaagcaa
tcaacacttcttgtcaatggttcccttaaacattaccagattcagggcttggagtggatg
gtttctctctataacaacaatttaaatggaattcttgctgatgaaatggggcttggaaag
acaattcagactattgcactcataacctatctgatggagcacaaaagacttaatggcccc
tatctcattattgttcctctctcgacattatccaactggcagtatgagtttgataaatgg
gctccttccgtggtgaagatcgcttacaagggaacgcctgcaatgagacgagctctggtg
ccccagctcaggagtgggaaatttaatgtcctcttgacaacctatgaatacatcattaaa
gacaagcacatcctcgcaaagatacgatggaagtacatgattgtagatgaaggacatcga
atgaagaatcaccactgcaagctaacacaagtcttgaacacccattatgtggctccaaga
cgtattcttttaactggcactccgcttcagaacaaactacctgagctttgggcccttctg
aatttccttttgcccacgatctttaaaagctgcagcacctttgaacagtggttcaatgct
ccatttgccatgacaggagagagggtggatttaaatgaagaagaaactatactgattatc
cgccgtctacataaagtgctgcgtcccttcttgttgagacggttgaaaaaagaagtggag
tcacagttaccagaaaaggttgaatatgtaattaaatgtgacatgtcagccctccagaag
attctgtatcgccatatgcaaggaaaaggtattctccttactgacggttcagagaaagat
aagaagggaaaaggtggcgccaagactctaatgaataccatcatgcaactacgaaagatt
tgtaaccaccctttcatattccagcatattgaggaatcctttgctgaacatctgggatat
gctaatgggatcatcaatgggcctgatctttacagaacttcaggaaagtttgagctactt
gatcgaatactaccaaagcttcgagccacaaatcacagggttctgcttttctgtcagatg
acttcactcatgaccattatggaagactactttgctttccgaaacttcctttaccttcga
ctcgatggtacaacgaagtcagaagatcgtgctgcattgctgaagaaatttaatgaagag
ggttcacagtatttcatatttttgctgagtaccagagctggaggtctagggttgaacctg
caggctgcagacactgttgttatttttgacagtgattggaatcctcatcaggatctgcag
gctcaggacagagcacacagaattggtcaacagaacgaggtgcgcgtcttacgcttgtgc
actgttaacagcgtggaagagaagattcttgcagcagctaaatacaaactgaatgttgat
cagaaagtcattcaggcaggcatgtttgatcagaaatcttcaagccatgaaagaagggca
tttctacaagccattctggaacatgaagagcagaatgagagccaaaagaaagatgacctt
tcaggagataattcccaagaaggtgccagccaggaggaagacgaagtcccagatgacgag
acactgaaccagatgattgctcgccatgaagaagagtttgacctgttcatgcgaatggat
ctagatcggcgcagagaggatgcccgaaatccaaatcgaaaaccacgtttgatggaagaa
gatgatcttccctcctggatcattaaagatgatgctgaagttgaacgactcacttgtgaa
gaggaggaggagaaaatatttggtagagggtcacgtcaacgtagggatgtggattacagt
gatgcactgacagacaaacagtggcttagggctatagaggacggaaatttggaggaaatg
gaagaggaagttcggctgaaaaaacgcaagcggcgaagaaatccggacaaagatgttgtt
gttgttgtaaaagatgatggagaaaagcgagagaaaaaaagaagaggacgtcctccagct
gaaaagttatcaccaaacccacctaaactaaccaaacagatgaatgtcatagttgacacc
gtaataaactacaaagacagttctggacggcagctaagtgaagttttcatacaactccct
tctagaaaagagttaccagaatattatgaattaatacgcaaaccagttgatttcaaaaag
ataaaggaaagaattcgcaatcataaatacagaagtataagtgacctagaaaaggatgta
atgttgctatgccacaatgcacagacgtttaatctagaaggatcccagatatatgaggat
tctattgttctacaatcggttttcaagagcgcaaggcaaaaaattgcaaaagaggatgaa
agcgaggaagaaagcaatgaagacgaagatgaggaggatgaagatgaatcagaatctgag
gcaaaatctgtgaaagtgaaaattaagctgaataaaaaggatgacaagaatcgagaaaaa
ggaaagggaaagaaacgccagggtcgtggtaaagccaaaccagttgttagcgactatgac
agtgatgaagaccaagatgaaaatgatcagacagaaggaagcgtaagtgacgacgagtga
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integrated database retrieval system
