Hyla sarda (Sardinian treefrog): 130274462
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Entry
130274462 CDS
T11475
Symbol
COL22A1
Name
(RefSeq) collagen alpha-1(XXII) chain isoform X1
Organism
hsq Hyla sarda (Sardinian treefrog)
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Paralog
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
130274462
NCBI-ProteinID:
XP_056378787
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Position
5:complement(371923806..372319381)
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AA seq
1624 aa
AA seq
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MWITGSQISRLLLVILFVVFKGGHSQAERAGCKNVHYDLIFLLDTSSSVGKEDFEKVRQW
VSNLVDTFEIEPDKTRVGVVRYSGKPSTEFDLGQYQTREDVKEAARNIKYYGGNTNTGDA
LRYITTYSFSEEAGGRPRERAIKKVAILLTDGRSQDLVLEAATAAHKAGIRIFAVGVGEA
LKEELEEIASDPNSAHVFHVSDYNAIDKIRGILRRRLCENVLCPNVKIEGNRFTHRNGER
DEIPGFDLMELFNIKDVVGGKESGVQSSFVRLGTFPIVQRTEDIFPQGLPDEYAFVTTFR
FRKTSRREDWYIWQIIDKYGIPQVSLRLDGENKVLEYSSVGVIKDAVKASFRSSQVSELF
DRNWHKIALKVQAKTVILYIDCKLVMTLPIEERENIDIQGKTVIGKRLYDSVPVDFDLQR
IVIYCDSRHAELETCCDIPSGPCVVTVVTEPPPVVTTPTVAEQRGTASSLNCSHCPFGEK
GDIGLPGPIGPMGPKGDTGNPGPLGPAGPKGEKGEVGRVISTKGEKGDQGGAGIQGLPGI
RGEKGEKGSFGPPGAFGKEGAKGERGDRGEQGEDGVAGPPGPQGLEGPKGPPGAPGPVGF
PGLQGERGEKGSHGEKGERGLDGFPGKPGQEGKEGIKGSIGLPGLKGLKGERGGKGEAGS
PGLPGSVVQQEGLKGEQGSPGPRGPPGLAGQAGPPGPEGPKGSLGPAGLEGQRGEKGEAG
LPGVDGISGPEGPPGPPGPAGPLGPTGLQGLPGEIGFTGKPGKIGPPGSTGKDGADGVDG
KPGQKGEQGERGLDGTPGLTGPRGQPGDRGLSGRPGEKGEAGPPGLSGADGKRGDKGDQG
QDGLPGPLGPKGEKGDQGSIGPPGAPGTAGATETVVGEPGEPGRHGEKGEKGEPGNHGEA
GPQGLTGEVGPLGPIGPQGPKGQEGAKGERGPKGDIGPPGLAGQSGARGLPGNVGNPGDA
GLPGKDGQKGEKGELGKEGKLGPPGPPGEAGLAGLPGLPGRGKDGERGERGFPGPHGQPG
SKGDRGPPGLPGQPGSRGPPGIGIDGTPGSPGTAGDKGEQGVKGLAGPPGPQGPPGQDGF
PGNPGDRGPPGEPGPASLIKTPDLEVYIKDMCRDCPPGPPGVPGIPGVKGDKGLPGSQGR
DGIDGKKGEQGAVGPPGPTGLDGMKGSRGDRGADGEPGQKGEKGIPGMPGFTGSPGNSGP
PGPDGLPGVMGPPGPTGEPGKEGPPGPKGPPGLMGLPGIAGKDGKDGKPGAPGEAGKPGD
LGPPGREGARGLPGFKGHRGDTGIPGSRGEPGVPGPPGREGSSGKDGDIGPPGHQGPRGI
RGPPGKNGLAGPPGNPGAPGLLGPKGSKGDTGAAGVPGFQGPKGPQGTPGENGSPGKEGI
PGKTGERGPKGDRGDPGTKGDKGMQGEKGQAGQPGSPGHKGHTGIMGPVGPPGERGISGH
PGPPGPQGLTGPRGDAPSTDTLRRLIQEELGKQLEAKLSYIMSQMQPAQIKSYQGRPGPP
GTPGKDGNEGRPGAMGEPGQPGIMGPEGPAGPMGPKGERGAKGERGEYGVGQRGEIGPPG
IPGVPGEPGYAKDGIPGIPGHQGEPGAPGPSGPQGPPGSNGQCDPSQCAYYASLGSRPGN
VKGR
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atgtggatcacagggagtcaaatatctcgcttgctacttgtgattttgtttgtagtgttt
aaaggaggacactcacaggcagagagagctggttgtaaaaatgtccattacgatttgatt
ttcctcttggacacctcctccagcgttggcaaagaggattttgagaaagttcgtcaatgg
gtttccaacttggtggacacttttgagattgaaccagataagacaagagtgggagtcgta
agatacagtggcaaaccgtcaacggaattcgacctgggacaatatcagacccgcgaggat
gtgaaagaagctgccaggaatatcaagtactatggtggaaacaccaatacgggggacgct
cttagatatatcacaacatatagtttctctgaggaggctggtggacggccccgtgaacga
gccattaaaaaagtcgctatccttctgaccgatggaagaagtcaagacctggtgttggaa
gctgcgacggccgcccataaagcgggaattaggatttttgctgtaggtgttggtgaagct
ctcaaagaagaactggaagagatcgcatcagatcccaattctgcccacgtcttccatgtc
tctgactacaacgccatcgacaaaatccgagggatattgagaagaagactttgtgaaaac
gtcctttgtccaaacgtgaaaattgagggtaatcgctttacacacaggaatggagaaaga
gatgaaattccaggttttgacctcatggagttattcaacataaaagatgtcgtcggaggg
aaagagtccggggttcaaagctcctttgtgcgtctagggaccttccccatcgtacagaga
accgaggatatatttccacaaggcttgccagatgaatatgcctttgtaaccacattcaga
ttcagaaaaacttccaggagggaagattggtacatttggcaaattattgacaagtacggg
atcccacaggtgtctttgaggttggatggagagaacaaagtcttagagtacagctcggtg
ggagtcataaaggatgcggttaaagccagtttccgtagcagccaagtcagtgaactgttc
gatcggaactggcataagattgctctgaaagtccaagccaagactgtcatcctctacatc
gactgcaagctggtcatgactttacctatcgaggaacgagaaaatatcgacatccaggga
aagaccgtgattggcaaacgcctctatgacagcgttcctgtagattttgatcttcagcgc
atcgtcatatactgtgactcgcggcacgccgagctggagacctgttgtgatattcccagc
ggcccgtgtgtggtcactgtggtcaccgaaccgccacctgttgtcacaacccccactgtg
gcggaacagagaggaacagcaagctccctaaactgctcacactgcccctttggagagaag
ggggatatcggccttccaggacctataggcccaatgggcccaaagggtgacactggcaat
cctgggccacttggacctgcaggtcctaaaggagagaaaggtgaagttggaagagtcatt
tcaactaaaggggagaaaggtgatcagggaggggctgggatacaaggacttccaggaatt
agaggagaaaaaggagagaagggatcttttgggcctcctggtgcattcggcaaggaagga
gccaaaggagagaggggcgacagaggagagcagggtgaagatggtgttgcggggccccca
gggccacaggggttggaaggaccaaaagggccccctggagctcctggaccagtgggattt
cctggcttacaaggagaacgaggtgaaaaaggaagccatggagaaaagggtgaaagaggc
cttgatgggtttcctggaaagccaggtcaagaaggaaaggagggtataaaaggcagcatc
ggattgccaggtctaaagggactgaaaggagagaggggtggaaaaggtgaagccggatcc
ccagggctacctggaagtgttgttcagcaggaaggacttaaaggagaacagggctcacct
ggacctcgcggccccccaggtcttgccggacaggctggaccaccagggccagagggaccc
aaaggcagccttggacctgctggactggaagggcagaggggagagaaaggagaggctggt
ttacctggtgtggatggcatctctgggcctgagggacccccgggaccaccaggacctgcc
ggacctctaggccctacaggcctccagggattgccgggtgagatcggattcactggaaaa
cctggaaagatcgggcccccgggatcaactggaaaagatggagccgatggtgtagatgga
aaacctggacaaaagggggaacaaggagaacgcggcttagatggaactccaggactgacc
ggtccaagggggcagcctggtgatcgaggactatctggacgacctggagaaaaaggcgaa
gccggccccccaggattgtcaggagcggacggaaagaggggagacaagggtgaccaggga
caggacggccttcccggaccattaggacctaagggagaaaaaggagatcagggttccatt
ggtcctcctggtgccccggggacggctggagcgacggagaccgtggtcggtgaacctgga
gaacccggacgtcatggagagaaaggagagaagggagaacctgggaatcatggagaagcg
ggacctcaaggactgactggagaagtgggcccgctaggacctatagggccgcagggtcca
aaaggtcaagaaggagccaagggtgagcgaggacctaagggagatattggcccaccaggt
cttgcaggtcaatctggagccaggggactaccgggaaatgtgggaaatccaggagatgcc
ggtttgccaggaaaagatggacagaagggcgaaaagggtgaactaggcaaagaaggaaaa
cttggcccaccaggcccacctggagaggctggattggccggtttgccgggactaccgggg
agaggcaaggatggcgaaaggggtgaacgtggatttcctggtccacatggacaacctgga
tctaagggagatagaggacctccaggactgcctgggcaaccaggatcccgtggaccaccg
ggtataggaattgatggtactccgggctccccaggaacagctggagataagggagaacag
ggtgttaaaggtctcgctggcccaccaggtccccaaggtcccccaggacaagatggtttt
ccaggaaatccaggagacagaggacccccaggtgaaccgggtccggcttcattgatcaaa
acaccagatttggaagtctatattaaggacatgtgccgagactgcccaccaggaccacca
ggagtgccggggatcccaggagttaaaggagataaaggtcttcctggttctcagggacgg
gatggcattgatggtaaaaagggagaacaaggcgccgtgggtcctcccgggccaacaggc
ttggacggtatgaagggcagtagaggagaccgtggagccgacggagaacctggacagaaa
ggtgaaaagggtattccaggaatgccaggcttcaccggatcgccgggtaattcgggacct
cctggacctgatggattacccggagtcatgggccctcccggccccacaggagaacccgga
aaagaaggaccaccagggcccaaaggcccccctggactcatgggactaccgggaatcgct
ggtaaagatggaaaagacgggaagcccggggcacctggggaagcagggaaaccaggagat
ttgggaccgccgggcagagagggggcccgaggactgcctggctttaaggggcacagagga
gatacaggaataccgggtagcagaggagaaccaggtgtaccaggacccccggggcgagaa
gggtcctcaggaaaagatggtgatattggaccaccaggacatcagggaccaagaggaatc
cgaggaccacctggcaaaaatgggttggctggacctccagggaatcctggggcaccaggt
ttattggggcctaaaggaagcaaaggagacacaggagctgccggagttccaggatttcaa
ggacccaaaggaccacaaggaacacctggagagaatgggtcacctggaaaagagggaatt
cctggaaaaacaggagaacgtggacctaaaggagacagaggtgatccaggtaccaaaggt
gacaaaggcatgcagggagaaaaaggtcaagctggacaacctggctccccaggtcataaa
ggtcacactggaataatgggccctgtaggaccaccaggagaacgaggaatatcaggacat
ccaggccctcctggaccgcaaggattgaccggcccaaggggagacgccccatcaaccgat
actctaagaagattaattcaagaagagttgggaaagcaactggaagcaaagttatcctac
atcatgtctcagatgcagccagcccagattaaatcctatcagggtcgaccgggaccacca
ggtactcctggaaaagatggaaatgaaggaagaccaggtgcaatgggagaaccaggacag
cctgggataatgggaccagaaggacctgcaggacctatgggtccaaaaggtgaaagagga
gcgaaaggtgaaagaggagaatatggagttggtcaaagaggtgaaatcggccccccagga
attccaggtgttcctggagaaccaggatatgccaaagatggaatcccaggaatcccaggt
catcagggtgaaccaggggccccaggaccttctggccctcagggacctcccggatcaaat
ggacaatgtgacccatcacaatgtgcctactatgccagtttaggatctaggcccggtaat
gtaaaaggacgttaa
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