Hyla sarda (Sardinian treefrog): 130275300
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Entry
130275300 CDS
T11475
Symbol
ABCA4
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4 isoform X1
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130275300 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsq02000
]
130275300 (ABCA4)
Transporters [BR:
hsq02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
130275300 (ABCA4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
ACT_13
AAA_22
AAA_15
AAA_29
AAA_23
Motif
Other DBs
NCBI-GeneID:
130275300
NCBI-ProteinID:
XP_056379090
LinkDB
All DBs
Position
6:5954998..6274076
Genome browser
AA seq
2162 aa
AA seq
DB search
MLTLFLLKDIGLSDSVVYQLINAQIRVEQFASGIPDLTLKDIACSQSLLERFIIFGSRRG
MHTVRNAMCVLSQQRLQRVEDVLYANIDFFKVFEILPTILDSRSRGVDLRFWGRVISNLT
DSLRELAQKQSIQDLLWVLRPIVQEGGPTTFSQLMTSLSDLFCGYPEGGGSRVFSFNWYE
DNNYKVFLGVNSTKKESYYSYDKTTTPFCNALMQGLESNPATKIAWSAMKPLLMGKILYT
PDAPAIRDILKNANVTFRQLERLRQMGKAWEEVGPQVWHFMQSSVQMNIIRDTIKNPTVK
DFLNRQLGDDGLSADDVINFLYNGNPDERPEGAANFDWRNVFNVTDHLLRLFNQYMECLT
LDKFEGHDDESHLTHHALYLLEENKFWAGLVFTDIFPWTNQVPPHVKYKIRMDIDVVEKT
NKIKDRYWDPGPRADPIEDFRYIWGGFAYLQDIIDHGIIKTQTNHDSPTGLYIQQMPYPC
FIDDVFMITLNRCFPIFMVLSWIYSISMLVKDIVLEKELRLKETMKNLGVTNEVMWFTWF
IDSFSVMTLSTFLLTIVIVGGGVLHYSNPLILFLFLMAFTLSTIMQGFLMSVFFSKANLA
AACSGVIYFTLYLPHILCFAWQDRMTFRLKTLASLLSPVAFGFGTEYLSRYEEQGLGLQF
GNIRKSPVEGDEYSFLFSIIMMLFDAFLYWILAWYIDHVFPGEFGIPRPWYFALLPTHWC
DFQNPVEVNVDSVETELSVHEHGEDNQEDKPPPEEVKEAKVENLKDVLDNKVTDKDRCKH
IIKKEKEKEEKQMKDEQEKERKDKDQGPDANPFFEPEPPGMIPGVCIQDLTKVYKNTYKA
AVDRMNLTFYEGQITAFLGHNGAGKTTVLSIITGLFPPTSGTVWVRGRDIQTHMDSIRQS
LGMCPQHNILFHRLTVEEHILFYAQLKGKSRKQAEREMEMMLEDIGIPHKRNEESQNLSG
GMQRKLSVAMALVGDSKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIILSTHHMDEAD
LLGDRIAIISQGKLYCSGSPLFLKNCFGTGFYLTLVRRMRNVKEPVKKDSASCRSDCSCT
CPSCAPKAKENPLEQELDGDVAGLTELIHHHVPEAKLIESIGQELIYLLPGKDFKYRAYA
SLFRELEETLGDLGLSSFGISDTPLEEIFLKVTADSVTGTETPDQETCLRKESRRSAAGD
VAPEDCKDQPAPTELKGKGSEQLKGSDLLHQQFKALLIKRFQHATRSQKDFLAQIVLPAS
FVLLALIFTLIVPPFGEYPSLTLHPWIYGQQFIFFSNEQPGSEQLVPLSNAFLNTPGFGT
RCMKDLPLGKKFSCTNTSSEWIIPTVSPSVTNILLGHEWTPHNPSPSCTCSTRNKLIMLP
ECPEGAGGRPPPQRIQPSSEILQDLTERNISDYLIKTYPTLIRSSLKSKYWVNEQRYGGI
SVGAKLPVLDVQGETIVDFFRHLGQMTNVSGGPVTKTVNRELQTFLTNLETENNIKVWFN
NKGWHSMVIFINVANNAILRANLGEDKDPEEYGITTENHPLNLTKDQLSEVTVLTTSVDV
VVAICVIFAMSFIPASFVLYLIQERVSNAKHLQFVSGVTPAVYWLTNFSWDIANYAISVA
MVVVIFIGFEKKAYTSSTNLPALIALLFFYGWAVIPMMYPASYLFNVPSTAYVALSCLNL
FIGINSSAITFILDLFENNRSLLKFNEKLKDLLLIFPHFCLGRGLIDLAMNQAVTDVYAR
FGEEHATNPFQWEFLGRNIFAMAVEGIVYFGLNLLIQNRFFLNTWFAEPPKGCIEGEDED
VAQERQRVMKGGGKNDILRLQELTKVYAGKHSPSVDSLCIGVRPGECFGLLGVNGAGKTT
TFKMLTGDIEVTSGDATVAGYSILTDITDVHQNMGYCPQFDAIDELLTGREHLQLYARLR
GVPEEEVNMVAEWGIEKLGLKRYADQSAGTYSGGNKRKLSTAIALIGCPPVVLLDEPTTG
MDPQSRRFLWNSIVSIIREGRSVVLTSHSMEECEALCTRLAIMVKGTFKCLGTIQHLKYK
FGDGYIVTMKIKAQKLGAAPDPEPTEKFIQTNFPGSIQREKHYNMLQYQICSSSLARIFQ
LLISNKEILNIEEYSVSQTTLDQVFVNFAKQQTEDEDIRLHPRAAGATRDVKVAPAPPTK
AS
NT seq
6489 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgctgttcttgctgaaggacatcggactgtctgactcggtcgtgtatcagctc
ataaacgctcaaatccgggtggaacagttcgcctccgggatacctgacctgactctgaag
gacatcgcctgcagccagagcctcctggagagattcatcatcttcggcagccgccgcggg
atgcacaccgtgcgcaacgccatgtgcgtcctgtcccagcagaggctacagagggtagag
gacgtgctgtacgccaacatcgacttcttcaaagttttcgaaattcttccgactatcctc
gacagccgttcccgtggggttgacctcagattctggggaagagtcatttctaatctgacg
gactctctcagagagttggcccagaagcagagtatccaggaccttctgtgggtcctgcgt
cctatcgtccaggagggggggccgaccaccttctcgcagctcatgacgtctctgtcggac
ctcttctgtggttatccggagggcggaggttctagagttttctccttcaattggtatgaa
gacaataactacaaggttttcctcggagtcaactccaccaagaaggaatcctattactca
tacgacaagacaaccacgccgttctgtaacgccctgatgcaaggtctggagtccaatcct
gcgacaaagatcgcatggagcgcaatgaagcctttactcatggggaaaatcctttatact
cctgatgccccagcaatccgcgacattctgaagaacgcgaatgtcacctttcggcagctc
gagcgcttgaggcaaatgggcaaagcctgggaagaagtgggtcctcaggtgtggcacttc
atgcagagcagcgtgcagatgaacatcatccgggacaccataaaaaacccaacggtgaag
gatttcctcaaccggcaacttggagacgacggactttctgctgatgacgtcataaacttc
ctgtacaacgggaatccggacgaacggccggagggagcggcaaattttgactggagaaac
gtgtttaatgtcaccgaccacctgctgcggctcttcaaccagtacatggagtgcttaacc
ttggataagtttgaaggtcacgatgatgaatcccatttgacccatcacgccctttactta
ctggaagaaaataaattctgggctggtctcgtgttcaccgacatattcccctggaccaat
caggtcccgcctcacgtcaaatacaaaatccgcatggatatcgatgtagtggaaaaaaca
aacaagattaaagatcgatattgggacccaggaccccgggctgaccccatagaggacttc
cgatatatctggggcggctttgcttatctccaggacattattgatcatggaattataaag
acgcagaccaatcacgactccccgaccggactgtacatccagcagatgccgtacccctgc
ttcatagatgacgtgttcatgataaccctaaatcgctgctttccgattttcatggtgttg
tcttggatttattccatctccatgctggtgaaagacattgtcctagagaaagagctgcgt
ctgaaggaaaccatgaagaatctgggggtcaccaatgaggtcatgtggttcacctggttc
atagacagcttcagtgttatgactctcagcacctttctcctcaccatcgtgatcgtgggt
ggcggagtccttcactacagcaatcccctaatcctgttcctctttctgatggccttcacg
ctgtccaccatcatgcaaggcttcctcatgagcgtcttcttctcgaaagccaacctggcg
gccgcctgcagcggagtcatttatttcacactctacttgccgcacatcctgtgcttcgct
tggcaggaccgcatgactttcagattgaagactttggccagtttgctgtcacctgtggct
tttggcttcggaacggaatatttatccagatacgaggagcaaggcctcgggttacagttt
ggcaacatacggaaaagtcctgtggagggagatgaatacagcttcttgttctccataatc
atgatgctttttgatgcttttctgtattggattctggcgtggtacatagaccacgtgttt
ccaggtgaattcggcatacccaggccctggtatttcgcgttgctgccgacacactggtgc
gattttcagaatcccgtggaagtgaacgtggattctgtggagaccgagctctcagtccac
gaacatggggaggataatcaagaagataagcctcctccagaggaggtgaaagaagccaaa
gtggagaatctcaaagacgtcctggataacaaagtcaccgacaaagatcgatgtaaacat
ataataaagaaagaaaaggagaaagaagaaaagcaaatgaaggacgaacaggagaaggag
agaaaggacaaggaccaggggcctgatgcgaaccccttttttgaacctgaaccccccggg
atgatccccggagtttgtatccaagatctgactaaagtctataagaacacgtacaaggcg
gcggtggacaggatgaatctcaccttttatgaaggacagatcactgccttcttagggcac
aacggagctgggaaaacaaccgtcctatctataataaccggattattcccccccacctcg
gggacggtctgggtccgcggcagagacattcagactcacatggattccatcaggcagagt
ctcggcatgtgcccccagcacaatattctttttcatcgattgacggtggaggaacacatt
ctgttttacgctcaactaaaaggtaaatcgaggaaacaggccgagcgggagatggaaatg
atgctggaagatatcgggatccctcacaaaaggaacgaggagtctcagaacctgtcaggt
ggaatgcagagaaaactatctgtcgccatggcgttggtcggtgattccaaagttgtggtt
ttggatgaacccacctctggtgtagacccgtactctagacggtcaatttgggatctgctg
ctgaagtaccgatcaggcaggaccatcattctgtccactcaccacatggatgaagctgat
ctcctgggggacagaatcgccatcatttctcaagggaagctttactgcagcggatccccc
ttattcctgaagaactgctttgggacagggttctacttaaccctggtcaggagaatgagg
aacgtgaaggaaccagtgaagaaggattctgcttcctgccgctccgactgttcctgcact
tgtccgagttgtgccccaaaagccaaagaaaatcctctggagcaagagctggatggtgat
gtggccgggctgacggagctcattcatcatcatgttcctgaggctaagctcatagaaagc
atcgggcaggaactgatctatctactgcctgggaaagacttcaagtaccgagcctacgcc
agtctgttcagagagttggaggagaccttgggggacctgggactcagcagttttggaatc
tcagatacaccgctggaagagatctttttgaaggttaccgccgactcagtgactggaaca
gagactccagatcaagaaacctgtttgagaaaagagtctcggagaagtgcggccggagat
gtcgcccctgaagactgcaaagaccaacctgctcctacagaactgaaaggcaaaggatct
gagcagctgaaaggcagcgacctcctgcaccagcagttcaaggcccttcttataaaacgc
ttccagcacgctacacgtagtcagaaagacttcctcgcccagattgtgcttcccgccagc
ttcgtgctgctggccctgatctttactctcattgttcctcctttcggtgaataccccagt
ctgacgcttcatccttggatctacggacagcagtttattttcttcagtaatgaacagccg
ggcagcgagcagctggtgccgctatccaacgccttcctgaacacccccggctttggcact
cgctgtatgaaggatctgcccctgggtaaaaagttctcctgtacgaacacatcgagcgag
tggatcatcccgaccgtgtctccgagcgtaaccaacatcctgctgggccacgagtggacg
ccccacaacccgtccccgtcctgtacgtgtagtacaagaaataagctgataatgctgccc
gaatgtcctgagggcgccggaggccgaccgccgccgcagaggatccagccgagctcggag
attcttcaggacctcacagaacgaaatatttcggattatctcatcaaaacataccccact
ctgatacgaagcagtctgaagagcaaatattgggtcaatgaacaaagatacggagggatt
tctgtgggcgcgaagcttcctgtcctggacgtacaaggagaaacgatcgtggacttcttc
agacatctgggacaaatgaccaacgtgtccggaggtcctgtcactaagaccgtaaaccga
gaactgcaaaccttcctgaccaacctggaaaccgagaacaacatcaaggtttggttcaat
aacaagggctggcattccatggtcatcttcatcaatgtggccaacaacgccatcctcaga
gccaacctgggagaggacaaagaccctgaagagtacgggatcaccaccgaaaaccatccc
ctcaacctcaccaaggatcagctgtcagaggtcactgtgttgaccacgtcggtggatgtg
gtggtcgccatttgtgtgatattcgcgatgtctttcatcccggcgagcttcgtactgtat
ctgattcaggagagggtctccaatgccaagcacctccagttcgtcagcggggtcaccccg
gccgtctactggctcaccaacttctcctgggatatagcaaactacgctatcagtgtcgcc
atggtggttgttatcttcatcgggtttgaaaagaaagcatatacgtcgtctacgaacctc
ccggcgctcatagctctgctcttcttctatggatgggctgtgatccctatgatgtatccg
gcgtcgtatctcttcaatgtgcccagtacggcatacgtggctttgtcctgtctgaatctc
ttcattggcataaacagcagcgccatcaccttcatcctggatctttttgagaataacaga
tctctgttgaagtttaatgagaagctgaaggatctgctgttaatcttcccgcacttctgc
ctgggccggggacttattgatctggcgatgaatcaggccgtgaccgatgtgtacgctcgc
tttggtgaagagcacgcaacaaaccctttccaatgggagttcctggggagaaatatcttt
gcgatggctgtagaaggaatcgtgtattttggactgaatctcctcatacagaaccgattc
ttccttaacacttggtttgcagaacctcccaaaggttgtattgagggagaagatgaagat
gtcgcacaagagagacagagagtgatgaaaggaggaggcaagaatgatatactacgacta
caggaactgacaaaggtttatgctggtaaacactcgccttctgtggactcgctctgcatc
ggtgtccgtcccggagagtgctttggtcttctgggcgtgaacggggctggaaagacgacc
accttcaagatgctgaccggagacatcgaggtgacctccggagatgctacagtggctgga
tacagtatcctgaccgatatcactgacgtgcaccagaacatgggttactgtccgcagttt
gatgctatagacgagctgctgactggtcgcgagcatctgcagctatatgcgcgtttacgc
ggagttcctgaagaggaagtcaatatggttgcagaatgggggattgaaaaactgggcctt
aaaagatacgccgaccaatcagcgggcacctacagcggggggaacaaacgcaagctatca
actgcaattgcccttattgggtgccctccggtggtattgttggacgagcccactacaggg
atggatcctcagtctcgacgcttcctatggaactctatagtcagtattatcagagaaggg
cgctccgtggtgctgacctctcacagtatggaggaatgtgaagcgctctgcactcgtctg
gctataatggtgaagggaaccttcaaatgtctgggaaccattcagcatctaaaatacaag
tttggagacgggtatatagttaccatgaagatcaaagcccagaagctcggagccgcgccg
gacccagaacccacagagaagtttatacaaacaaactttcctggcagtatacagcgcgaa
aaacactacaacatgttacagtaccagatctgctcctcttccctggccaggatattccag
ctcctgatctccaacaaggaaatcctcaacatcgaggaatattctgtgtcccagaccacg
ttagaccaggtatttgtaaacttcgctaaacagcagacggaagatgaggatatccgccta
catccgcgagctgctggagccacacgggacgtcaaagttgcaccagctccacccacaaag
gcttcttaa
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integrated database retrieval system
