KEGG   Hyla sarda (Sardinian treefrog): 130275481
Entry
130275481         CDS       T11475                                 
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
hsq  Hyla sarda (Sardinian treefrog)
Pathway
hsq03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hsq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130275481 (PRPF38B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsq03041]
    130275481 (PRPF38B)
Spliceosome [BR:hsq03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    130275481 (PRPF38B)
SSDB
Motif
Pfam: PRP38
Other DBs
NCBI-GeneID: 130275481
NCBI-ProteinID: XP_056379490
LinkDB
Position
6:complement(36470439..36495624)
AA seq 498 aa
MANNNAAALGGTPQPTQTGGGGNKSAPSGKPGNVLPLWGNEKTMNLNPMILTNILSSPYF
KVQLYELKTYHEVVDEIYFKVNHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLL
YKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWYEDFLDDEEDLDVKA
GGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKHIDQQIKSKPRKVKEKAAEEVEEVQ
RHVERRRSRSPKRSASPRRSPRRSRSRSHHREHHGTTSFDRELERERERQRVERESKDKR
RSRSNERRRSKSRERHRTRSRSRDRKTERRDKDREKENERSRKRDHEKKGNCREKDMERP
RERSKERKRSEEKKDREERRHREDRESRKERRHSRSRSKERKQRKSRSPSKNARGRSRSK
EKSNRQKDKPNKRSRSSSHGRADSAEKSRKREQSSSRERPRKRSRSKDRGHKREYDSKDH
DRHSSDNEEKQRVKDDAL
NT seq 1497 nt   +upstreamnt  +downstreamnt
atggcgaataacaacgcggcggccctcggggggaccccgcaacctactcagacaggtggt
ggtgggaacaaatctgccccctctgggaagcccgggaatgtgctgccgctgtggggcaat
gaaaagactatgaacctgaaccccatgattctgaccaacatcttgtcctctccatatttc
aaggtgcagctgtatgagctgaagacctaccatgaggtggtggacgagatctattttaag
gtaaatcacgttgaaccatgggagaaaggaagtcgaaaaactgctggacaaaccgggatg
tgcgggggggtacgtggtgttggcacagggggcattgtatcgaccgccttctgtctcctc
tataaactgttcaccctgaagttgacaagaaaacaagtaatgggcctcatcacgcacaca
gactccccttacattagggcacttgggttcatgtacataaggtacacacaaccccctact
gacttatgggactggtatgaagactttctcgatgacgaagaggacctggatgtgaaagct
ggcggaggctgcgtgatgacaataggagagatgttacgttcattccttaccaagctggaa
tggttctctactctgttcccaagaatccctgtcccagtgcaaaaacacatagaccagcag
attaagagcaaaccaagaaaggtcaaggagaaagctgcggaggaagtagaggaagttcag
cgtcatgtggagaggagacggtccaggtctccgaaaaggtccgcaagtcctcgaaggtct
cccaggagatcaaggagcagaagccatcatagggaacatcacggaacaacaagttttgac
agggaattagagcgagaaagagaacgacagcgggtagaacgcgaatccaaagacaaacga
cgatcgcgaagcaatgaacgtagacgaagcaaaagtcgagagaggcacaggactaggagt
cggagcagagaccgcaagacagagcgcagagacaaggacagagaaaaagaaaacgagaga
agcagaaagcgggaccacgagaaaaagggcaactgcagggaaaaggatatggagagaccc
agagagcgttccaaagagcgcaagaggagtgaggaaaagaaagatcgagaggagcgacgg
cacagagaggacagagaatcgcgtaaggaaagaagacacagccggagtaggagcaaagaa
cggaagcagagaaagagtaggagccccagcaaaaacgcccgcgggaggagccgaagcaaa
gaaaaatcaaacaggcagaaagataaaccgaacaaacgtagtagaagcagtagccacggg
cgggcggacagcgcagagaagtcacgaaagagagaacaaagctcaagtagggagaggccg
cggaagagaagtcgtagtaaagacagaggccacaaacgcgagtacgacagcaaggaccac
gaccgtcacagctctgacaatgaggagaagcaaagagtcaaagatgacgctctgtga

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