Hyla sarda (Sardinian treefrog): 130275481
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Entry
130275481 CDS
T11475
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130275481 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsq03041
]
130275481 (PRPF38B)
Spliceosome [BR:
hsq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
130275481 (PRPF38B)
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Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
130275481
NCBI-ProteinID:
XP_056379490
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Position
6:complement(36470439..36495624)
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AA seq
498 aa
AA seq
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MANNNAAALGGTPQPTQTGGGGNKSAPSGKPGNVLPLWGNEKTMNLNPMILTNILSSPYF
KVQLYELKTYHEVVDEIYFKVNHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLL
YKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWYEDFLDDEEDLDVKA
GGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKHIDQQIKSKPRKVKEKAAEEVEEVQ
RHVERRRSRSPKRSASPRRSPRRSRSRSHHREHHGTTSFDRELERERERQRVERESKDKR
RSRSNERRRSKSRERHRTRSRSRDRKTERRDKDREKENERSRKRDHEKKGNCREKDMERP
RERSKERKRSEEKKDREERRHREDRESRKERRHSRSRSKERKQRKSRSPSKNARGRSRSK
EKSNRQKDKPNKRSRSSSHGRADSAEKSRKREQSSSRERPRKRSRSKDRGHKREYDSKDH
DRHSSDNEEKQRVKDDAL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcgaataacaacgcggcggccctcggggggaccccgcaacctactcagacaggtggt
ggtgggaacaaatctgccccctctgggaagcccgggaatgtgctgccgctgtggggcaat
gaaaagactatgaacctgaaccccatgattctgaccaacatcttgtcctctccatatttc
aaggtgcagctgtatgagctgaagacctaccatgaggtggtggacgagatctattttaag
gtaaatcacgttgaaccatgggagaaaggaagtcgaaaaactgctggacaaaccgggatg
tgcgggggggtacgtggtgttggcacagggggcattgtatcgaccgccttctgtctcctc
tataaactgttcaccctgaagttgacaagaaaacaagtaatgggcctcatcacgcacaca
gactccccttacattagggcacttgggttcatgtacataaggtacacacaaccccctact
gacttatgggactggtatgaagactttctcgatgacgaagaggacctggatgtgaaagct
ggcggaggctgcgtgatgacaataggagagatgttacgttcattccttaccaagctggaa
tggttctctactctgttcccaagaatccctgtcccagtgcaaaaacacatagaccagcag
attaagagcaaaccaagaaaggtcaaggagaaagctgcggaggaagtagaggaagttcag
cgtcatgtggagaggagacggtccaggtctccgaaaaggtccgcaagtcctcgaaggtct
cccaggagatcaaggagcagaagccatcatagggaacatcacggaacaacaagttttgac
agggaattagagcgagaaagagaacgacagcgggtagaacgcgaatccaaagacaaacga
cgatcgcgaagcaatgaacgtagacgaagcaaaagtcgagagaggcacaggactaggagt
cggagcagagaccgcaagacagagcgcagagacaaggacagagaaaaagaaaacgagaga
agcagaaagcgggaccacgagaaaaagggcaactgcagggaaaaggatatggagagaccc
agagagcgttccaaagagcgcaagaggagtgaggaaaagaaagatcgagaggagcgacgg
cacagagaggacagagaatcgcgtaaggaaagaagacacagccggagtaggagcaaagaa
cggaagcagagaaagagtaggagccccagcaaaaacgcccgcgggaggagccgaagcaaa
gaaaaatcaaacaggcagaaagataaaccgaacaaacgtagtagaagcagtagccacggg
cgggcggacagcgcagagaagtcacgaaagagagaacaaagctcaagtagggagaggccg
cggaagagaagtcgtagtaaagacagaggccacaaacgcgagtacgacagcaaggaccac
gaccgtcacagctctgacaatgaggagaagcaaagagtcaaagatgacgctctgtga
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