Hyla sarda (Sardinian treefrog): 130275827
Help
Entry
130275827 CDS
T11475
Symbol
PHF2
Name
(RefSeq) lysine-specific demethylase PHF2 isoform X1
KO
K19414
lysine-specific demethylase PHF2 [EC:1.14.11.-]
Organism
hsq Hyla sarda (Sardinian treefrog)
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsq03036
]
130275827 (PHF2)
Chromosome and associated proteins [BR:
hsq03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
130275827 (PHF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JHD
JmjC
PHD
Cupin_8
PHD_5
PHD_ash2p_like
Motif
Other DBs
NCBI-GeneID:
130275827
NCBI-ProteinID:
XP_056380281
LinkDB
All DBs
Position
6:complement(82994768..83312655)
Genome browser
AA seq
1087 aa
AA seq
DB search
MATVPVYCICRLPYDVTRFMIECDACKDWFHGSCVGVEEDEAPDIDIYHCPNCEKTHGKS
TLKKKRNWHKHDTGQATDVKPVQNGSQVFIKELRSRTFPSAEDVVTKLVGSQLTVEYFED
TGFTEPILVPKKDGLGLSVPAPTFYVSDVENYVGPERVVDVTDVTKQKDCKMKLKEFVDY
YYSTNRKRVLNVTNLEFSDTRMSSFVESPDIVKKLSWVDNHWPDDALLAKPKVTKYCLIC
VKDSYTDFHIDSGGASAWYHVLKGEKIFYLIRPASANLSLYERWRSAANHYEMFFADQVD
KCYKCTVKQGQTLFIPSGWIYATLTPVDCLAFSGHFLHSLSVEMQMRAYEVEKRLKIVSL
TQFPNYETACWYVGRHLMEKFKALHKSGKQPVPHLVQGAKILNGAFRSWTKKHALLEHED
ELPEHFKPSQLIKDLAKEIRLTENASKVNKVDISANTIPEVNNIPEVKIEKEEPPSPVPD
SPPPVEKVQKKKTPKNEKLPKPPKPPKPPKEIKPPKVAKLPKPPKPPKSPKSKEGGKKKT
KKVKDSPSSVPDSPDLDVLEAHTKDALVKVETPKKVTTPKEEISVPIKEETTKQHNNEIE
KFEIREQNKIKTEAKWKYKNSKPDSLLKMEEEHKIQKSPFSSIKDSKFKFSFTGKKLFSH
KGIKPQNSPSIFGSLQNFKEDKNKPIRDEYEYVSDDGELKIDEFPIRRKKTTTKRDLSFL
SDTKEIPPLVPAKKPKVLEKKYKSDDSSDEGSLHIDTEAKPARNSKVKKDSTSSGGILDL
LQASKEVGGLDYNSNSQPPASPSTQEAIQGMLSMANLPSDSCLQTSWSTNQSKNNSISAQ
NSKKSGNNKCTSKRVSKKATKNNITADDYEEEQDNLGACFKDSDFVYPSLESDEDNPVFK
SRSRKRKCSDDAPYSPTARVGPSIPRQDRPIREGTRVASIETGLAAAAAKLSQQEEKKVK
KKKNTKKKLSPNNTNKLCQESSSPEATKLESLDTSLTDHEYTAGVSTFGVAQVNRGSQPM
APGVFVTQRRPSVSSQNNSAAKDSNKHLRKDIFWKTFVRDALIGDFTKPFDYGKFGRRRA
LRVPAFK
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggtgcctgtgtactgcatctgccgcctgccctacgacgtgacccgctttatg
atcgagtgcgacgcctgcaaggactggttccacggcagctgtgtcggcgtggaggaagat
gaagctcctgatatcgatatctaccactgtccaaattgtgaaaagacccacgggaagtct
acattgaaaaagaaaagaaattggcacaaacatgacacgggacaagctacagatgtcaaa
ccagtccagaatggcagtcaagtctttattaaagaactccggagtcgaaccttcccaagt
gctgaggatgtggtcaccaaactggtcggtagtcagttaacagtggaatattttgaagac
actgggtttacagaaccaattctggtgccaaagaaagatggcctgggtctctctgtacct
gctcccacattctatgtcagcgatgttgaaaactatgttggtcctgagagggtggttgat
gttacggacgtcacaaaacagaaggactgcaagatgaagctcaaggagtttgtcgattat
tactacagcacgaacaggaaaagggttctcaatgtaaccaacctagaattctcagacacc
agaatgtccagctttgttgaatccccagacattgtcaagaagctctcgtgggtggacaac
cattggcctgatgatgctctcctcgcaaaaccaaaagtgaccaagtattgtttgatatgt
gtaaaagacagctacactgacttccacatagactcggggggtgcctcagcctggtaccat
gtgcttaaaggggaaaaaatattttatctgatcagaccggcttcagccaatctctcccta
tacgaacgctggagatcagctgccaatcactatgagatgttctttgcagatcaagtagac
aaatgttacaagtgtacagttaaacaagggcagactcttttcattccatcagggtggatc
tacgcaacattgacccccgtggattgtttagcattttctggtcacttccttcacagtctc
agcgtggaaatgcaaatgagggcatatgaggtagaaaagagactgaagattgtcagctta
acacagttcccaaattatgagacagcctgttggtatgtgggcagacacctgatggagaag
ttcaaagcattacataagtcggggaagcagccggtgcctcaccttgtccagggggccaaa
attctcaatggagcttttagatcatggacgaaaaaacatgctctattagaacatgaggat
gaacttccagaacatttcaaaccctcacagcttatcaaggaccttgccaaagaaatacgg
ttaacagagaatgcatcgaaagtcaacaaagtagacatcagtgccaacacaattccagaa
gtgaacaatattccagaagtgaaaatcgagaaagaagaacctccctcacctgtgccagac
tctcctccacctgtggaaaaagtacagaaaaaaaagactcctaagaacgaaaagttaccc
aagcctccaaagccacctaaaccccccaaagagataaaacctccaaaagttgccaaactg
cccaaacctcccaaaccccctaaatcacctaaaagtaaagaaggagggaaaaagaagaca
aagaaggtcaaagattcaccatcttcagtaccagactcccctgacctcgatgttcttgag
gcccacactaaggatgctctggttaaagttgaaacaccaaagaaagtaacgacacctaaa
gaagagattagtgtcccgatcaaagaggaaacaactaaacaacacaacaatgagatcgaa
aagtttgaaatccgagagcagaataaaatcaaaactgaagcaaagtggaaatacaagaac
agcaagccagattccttactgaaaatggaagaggagcataaaatacagaaaagcccattt
tcctccattaaggatagcaaattcaagttctccttcactggcaagaaattgtttagtcat
aagggaatcaagccccagaacagccctagcatctttggatccttgcagaattttaaagaa
gataaaaacaagccaatccgagatgaatatgaatatgtctcagatgacggggaactgaaa
atcgatgagtttccaatcaggaggaagaaaacgacaacaaagagggatttatcattttta
tcagatacaaaggaaattcctcctcttgtgccagccaagaaacccaaagtcctggaaaag
aagtataagagtgacgactcctccgacgagggatctctgcacattgacacagaagcgaaa
ccagcccgaaattccaaagtgaagaaggacagcacaagttctgggggcattctggacctt
ttgcaagcaagtaaagaagttggtggcttggattataattcgaatagtcagccgcccgca
tccccaagcacacaagaagcaatacagggcatgttgtcgatggctaacttgccttctgac
tcctgtctacagacgtcatggagtacaaaccagtctaaaaataactccatatcagcccaa
aactcaaagaaatcaggcaacaacaagtgtacaagcaagcgggtcagcaagaaagccacc
aagaacaacatcacagcggacgactacgaggaggagcaggacaacctgggagcgtgcttt
aaagactccgactttgtttacccatctctcgagtcagatgaagataatcctgtgttcaaa
tcccgttcacggaagagaaaatgttctgatgatgctccatatagccccacagccagagtt
ggcccctccataccgcggcaagacagacctatccgtgaaggtacgagagttgcctctatt
gaaacgggacttgcagctgctgcagccaagttatcccagcaggaggaaaaaaaagtcaag
aagaaaaagaatacaaaaaagaagctttcacctaacaacacaaataaactttgtcaggaa
agcagttctcctgaagccacaaagctggaatctctggacactagtctaacagaccacgag
tacacggccggtgtcagcacgtttggtgtagcccaagtaaacagagggtctcagcctatg
gcccccggggtgttcgtcacacaaaggagaccgtctgtgtcttcccaaaataactcagct
gccaaagattctaacaaacatcttagaaaagacatcttctggaagacatttgtaagagac
gcacttatcggtgacttcactaaacctttcgactatgggaaatttggaaggagacgggct
ctgagagtgccagcatttaaatga
DBGET
integrated database retrieval system
