Hyla sarda (Sardinian treefrog): 130276629
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Entry
130276629 CDS
T11475
Symbol
NUDT21
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130276629 (NUDT21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsq03019
]
130276629 (NUDT21)
Messenger RNA biogenesis [BR:
hsq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
130276629 (NUDT21)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
130276629
NCBI-ProteinID:
XP_056382245
LinkDB
All DBs
Position
6:complement(202832331..202846529)
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AA seq
227 aa
AA seq
DB search
MSVIPPNRSQTGWPRGVNQFGNKYLSQTKPLTLERTINLYPLTNYTFGTKEPLYEKDSSV
AARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEG
LKRLMTEILGRQDGVQQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQ
EKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgattcctcccaatcgttctcagaccgggtggccgagaggagtcaatcagttt
gggaacaagtacctgtcacagaccaagcccctgaccctggagaggaccataaacctgtat
cctctgactaactacacatttggaaccaaggagcccctgtatgagaaggacagctctgtg
gcggctcgattccagcgaatgcgggaagagtttgataagattggcatgaggcgcactgtg
gagggtgtcctgatcgtacatgaacacagattaccccatgttctgttattgcagctggga
accacattttttaaactgcccgggggagaactcaaccctggagaggatgaggtagaaggg
ttaaagcgccttatgacggaaatccttggccgtcaggatggggtgcagcaggattgggtc
attgatgactgtattggtaactggtggaggccaaactttgaaccaccacagtatccatat
attcctgcacatattacaaagccaaaagaacataagaagctgttccttgtgcaacttcag
gaaaaggcattatttgcagttccaaaaaattacaaacttgttgctgcccctttgtttgaa
ttgtatgacaatgcccctggttacggacccatcatttccagccttccacagcttcttagc
aggttcaactttatctacaactga
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