Hyla sarda (Sardinian treefrog): 130277223
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Entry
130277223 CDS
T11475
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
hsq Hyla sarda (Sardinian treefrog)
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsq03041
]
130277223 (TFIP11)
Spliceosome [BR:
hsq03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
130277223 (TFIP11)
Other components
Complex C specific factors
130277223 (TFIP11)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
130277223
NCBI-ProteinID:
XP_056383650
LinkDB
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Position
6:289412067..289488044
Genome browser
AA seq
820 aa
AA seq
DB search
MSMSHLYGKDEDSDGVEMESFQITDWDIQNEFNPNRRKHWQTKEEATYGMWAERDSDDER
PSFGGKKSRDYSAPVNFISAGIRKPAAEEKSGSDSDSPNEAPRKVEEIQPKKLRTGGNFK
PLQKTFAGGIKSNTDFGSWERHTKGIGQKLLQKMGYVPGKGLGKNAQGITAPIEAKQRKG
KGAVGAYGSERTKQSLKDFPTVDSEEEEDQEFQKELSQWRKDPGGGKKKPKYAYKTVEEL
KAKGIGAKAMTAPQKEISQVKVIDMTGREQKVYYSYSQISHKHNIPGETPAVGKEEKPQG
FVLPELEHNLQLLIEMTEQEIIQNDRQLQYERDMVVNLTHELEKLSEVLSREDKAIYNLS
QVLKTVEECEERMQPGCDNPLTLEECARIFQMLQDKYYEEYKMSEKADLAVAIIYPLMKE
YFKDWNPLRDPTYGIDIMTKWKDLLEEGHLSHSAQNSSMDTYHRLLWETWVPFLRNVISQ
WQPRNCAPMVDFLDSWVHLLPIWILDNVLDQLIFPKLHKEVENWNPLTDTVPIHSWIHPW
LPLMQSRLEPLFSPIRNKLANALQKWHPSDTSAKLILQPWRDVFTPGSWEAFMVKNIAPK
LGMCLGEFVINPHQQHMDVFHWVMDWEGMISLSSLVGLLEKHFFPKWLQVLCSWLSNNPN
YEEITKWYLGWKSMFSDQILAHPGIKDRFNEALDIMNRAVSSNVGAYMQPGARESIAYLT
QTERRKDFQYEAMQERRDAESIAQRGIGVTAVPMNFKDLIQSKAEEHNIVFMPLIGKRHE
GKQLYNFNRIVIYIDRGVVYVQGEKTWVPTSLQSLIDMAK
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcacacctgtacggcaaagatgaggacagcgatggggtggagatggagagc
ttccagatcaccgactgggacatacagaacgagttcaacccaaaccgccggaagcactgg
cagacaaaggaagaagccacgtacggcatgtgggccgagcgcgactccgatgatgagcgg
ccgagttttggtggcaagaagtcacgtgactactccgcgccagtaaatttcatcagcgct
gggatccgcaagcctgcagcagaagagaagtccggcagcgattccgacagtccgaacgaa
gcccctcgaaaagtagaggagatccagccaaagaagctgagaacgggcgggaattttaag
cctttacagaaaacatttgccggaggaatcaaatccaatacggattttggctcttgggag
agacacaccaaggggattggtcagaagctcctgcagaagatgggatatgttcctggcaaa
ggcttgggaaagaacgcacaaggtatcactgctcctattgaggccaagcaaaggaaaggt
aaaggagctgtgggcgcctatggctcagaaaggaccaagcagtcattgaaagatttccct
acggtggattccgaggaagaggaagatcaggaatttcagaaagaattgagtcagtggaga
aaggacccgggtggaggcaagaagaagcccaagtatgcctacaagacagtggaggagctc
aaagccaaggggatcggggcgaaagccatgactgctccgcagaaggaaatatcacaagtc
aaggtgattgacatgactggacgagagcagaaagtctattacagctacagtcagatctct
cataaacacaacatcccaggagagacccccgcagtagggaaagaggagaagcctcagggg
tttgtcctgcccgaactagagcacaacctgcagctactgatcgagatgactgagcaggag
atcatccagaatgaccggcagctgcaatacgagagagacatggtcgtcaacctgacccac
gagttggagaagctctccgaagtgttatcgagggaggacaaagccatttataacctgagc
caggtcctgaagactgtggaggagtgtgaggagaggatgcagccgggctgtgacaatccc
ctcaccctggaggagtgtgcgcgcatattccagatgctgcaggacaagtattacgaagaa
tacaagatgtcagagaaggccgacctggcagtggccatcatctaccccctgatgaaggaa
tacttcaaggactggaatcccttaagggaccctacatacggcattgatattatgaccaag
tggaaggatctcctggaagaaggtcatctgtcccacagtgctcagaactcatcaatggac
acatatcacagacttctttgggagacatgggttccgttcctgaggaatgtcatctcacag
tggcaacccagaaactgcgcacccatggtggacttcctggatagctgggtccacttgttg
ccaatctggatcctggataatgtactggaccagctcatcttccctaaattacataaagag
gttgaaaactggaacccccttacagacactgtacccatacactcatggattcacccctgg
ctgccattaatgcagtctcgtctagagccgctgttctctcccatcagaaacaagctggcc
aatgcccttcagaagtggcaccccagcgacacctctgccaagctcatcctgcagccctgg
agagatgtctttacccccggatcgtgggaagccttcatggtgaaaaatattgcacccaaa
ttgggtatgtgtctcggagaatttgtcattaatccgcaccagcagcacatggacgtgttc
cactgggtgatggactgggaggggatgatctcgctgtcgagcctggtaggactcctggag
aaacatttctttccaaaatggctccaggttttatgctcctggctcagcaataatcccaac
tatgaggagataacaaagtggtatctgggctggaagtccatgttctctgaccagatttta
gcccatcctggaatcaaggaccggttcaatgaagcgttggacataatgaacagagccgtt
tcctctaatgtcggtgcgtacatgcagccgggtgcccgggaaagcatcgcctacctgacc
cagacggagcgaagaaaagacttccagtacgaagccatgcaggagcggcgggatgcggag
agcatcgcgcagaggggcatcggagtcaccgcagtacccatgaacttcaaggacctgatc
cagtcgaaggcggaggagcacaacatcgtcttcatgcccctcatcggcaagcggcacgaa
gggaagcagctgtacaacttcaaccgtatcgtcatctacatagacagaggcgtggtgtac
gtgcagggggagaagacctgggtgcccacctctctgcagagcctcatagacatggccaag
tag
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