Hyla sarda (Sardinian treefrog): 130281591
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Entry
130281591 CDS
T11475
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq04110
Cell cycle
hsq04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130281591 (SMC3)
04114 Oocyte meiosis
130281591 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsq03036
]
130281591 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hsq00535
]
130281591 (SMC3)
Chromosome and associated proteins [BR:
hsq03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
130281591 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
130281591 (SMC3)
Proteoglycans [BR:
hsq00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
130281591 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
130281591
NCBI-ProteinID:
XP_056384951
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All DBs
Position
7:complement(18252219..18307512)
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSSKRETSGEKSRQLRDAQQDARDKMEDIERHVREMKSKISAMKEEKEQLSSERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFSSVKQKEEN
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYTKLDQDLSEVKARVEELDKKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVINGYHGIVMNNF
DCEPAFYTCVEVTAGNRLFYHIVESDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNHRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKVEDELHALEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRLQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLDDQKRVDALNDEIRSLQQENRQLLNERIKLEGTITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKETLARSDGLDVTIDKTEAEIKDLVKS
MDRWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELERGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFTKLVPSGKATLVMKKGDVEGGQSQDEGEGSAESEKG
SSSQSSVPSVDQFTGVGIRVSFTGKQAEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELASHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEQAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggtgatcatccagggcttccgaagctacagagatcagaccattgtg
gatccttttagttctaagcacaatgtgattgtgggaagaaatggatctggcaaaagtaat
tttttctatgccattcagtttgtacttagtgatgagttcagtcacttgcgcccagagcag
cgtctggctctgctgcatgaaggaacaggccctcgggtcatttcggcttttgtggaaatc
atatttgacaactccgacaaccgtctgccgattgacaaggaggaggtttcccttcgaaga
gttattggggccaaaaaggatcagtatttcttggacaagaaaatggtgactaagaacgat
gttatgaatctattggaaagtgctggtttttctcgaagtaatccatactacattgtaaaa
cagggaaagattaaccaaatggcaacagccccagattctcaaaggttgaaactgctccgt
gaagttgccgggaccagggtatatgatgagcggaaagaagagagtatctcgctaatgaag
gaaactgagggtaaacgggagaagattaatgaactgctgaaatacattgaggaaaggctg
cacactctagaggaagagaaagaagaactggcacagtaccaaaagtgggataagatgagg
agagccctggagtacaccatctacaaccaggagctgaatgagacccgggctaagcttgat
gagctttcgtcaaaaagagagacaagtggtgaaaaatcaaggcagctgagagatgcacaa
caggatgcccgggataaaatggaggatattgaacgtcacgtacgagagatgaagtcaaag
atctctgcaatgaaagaagagaaggagcagctaagttctgaacgacaagagcagataaag
caaaggaccaaactggagttgaaagctaaggatctgcaggatgaactggctgggaacagt
gaacagcggaaacgtcttttgaaagaaagacagaaattactggaaaagattgaggaaaag
cagaaagagctggcagagacagagcctaagttctctagtgttaaacagaaggaggaaaat
ggcattgcaagattagcacaagccacccaggaaagaacagatctgtatgccaagcaaggc
cgtggcagtcagtttacatcaaaagaagaacgagacaagtggattaagaaggaactgaag
tccttagaccaagccataaatgacaagaaacggcagatagctgcgatacacaaagatctt
gaagacactgaggcaaataaggagaaaaatcttgagcaatacactaaattggatcaagat
ctaagtgaagtaaaagctcgagttgaagaactggacaagaagtactatgaagtgaaaaac
aagaaagacgagttacagagtgagagaaattacttatggcgagaagagaatgctgagcag
caggcacttgccgctaagcgagaggatctagaaaagaaacagcaacttcttcgagctgca
acaggaaaggctatattgaatggcattgacagcattaataaggtcctagagcacttcaga
agaaaaggcatcaaccaacatgtcattaatggctatcacgggattgtcatgaacaatttt
gactgtgaaccggctttctacacttgtgtcgaggtcactgctggcaacaggctgttctat
catattgtggaatcagatgaggtcagcaccaagatcttgatggagtttaacaagatgaac
cttcctggagaagtgacgttccttcctctcaacaagctggatgtgagagatacagcgtac
ccagagacaaatgatgctattccaatgattagcaagttacggtacaatcatcggtttgat
aaagctttcaagcatgtttttggaaagactcttatatgtcgcagtatggaggtatccaca
cagctggccagggcatttacaatggattgtatcacccttgaaggggatcaggtcagccat
cggggtgcactgactggtggttactacgatacaaggaaatctaggttggaactgcagaaa
gacgtgcgcaaggtagaagatgagctccatgctttggaggctaaactgaatgagaacttg
aggaggaacatagagaggattaataatgaaatcgaccagctgatgaatcagatgcagcag
atcgaaacacaacagagaaaatttaaagcttccagggacagtatcttgtcagagatgaag
atgctgaaggagaaacgacttcagtcagagaagacattcatgccaaagcaacgtagttta
caaagcttggaggccagtttacatgcaatggagtcaacccgggagtcgctaaaagccgag
ctgggaacagacttattatctcagctcagtctggatgatcagaaaagggtggacgctctg
aatgatgagatccgaagtctgcagcaagaaaaccgacaacttttgaacgagagaatcaaa
ctggaaggaacaatcacccgtgtggagacctacctgaatgagaatctgcggaagagattg
gaccaagtggagcaggaactgaatgagttgagggaaaccgaaggagggaccgttcttaca
gcaactacttcagaactggaggccatcaacaaacgggtgaaggaaacattggctcggtca
gatggtcttgatgttaccattgataaaaccgaagctgagataaaagaccttgtaaagagt
atggatcggtggaaaaatatggagaaggagcatatggatgccattaaccatgacacaaaa
gaacttgagaaaatgaccaacaggcaaggaatgcttttaaagaaaaaagaggaatgtatg
aagaagatacgagagctgggctcccttcctcaagaggcctttgaaaagtatcaaacccta
agtttaaaacagttattccgtaaattagagcagtgtaacactgagctgaagaagtacagt
cacgtgaacaagaaagctctggaccagtttgtaaacttctcagaacagaaagagaagctt
atcaagcgtcaggaagagcttgaacgtggctacaaatccatcatggagctgatgaatgtt
ctggaacttcgcaaatatgaagccatccagctgacgttcaagcaggtgtcaaagaacttc
agtgaagtgttcacaaagctagtgccaagtggtaaggccacactggtgatgaagaaagga
gacgtggaaggaggccagtctcaagatgaaggggagggcagtgcggagagtgagaagggt
tccagctcccagagcagcgtcccttctgtcgaccaattcactggcgtcgggattcgggtc
tcgttcacagggaagcaagcggagatgagagagatgcagcagctttctggtggtcagaag
tctttggtggcgttggctttgatttttgctatccagaaatgtgatcctgctcccttttac
ctttttgatgaaattgaccaggctttggatgctcagcacaggaaggccgtgtcagatatg
atcatggaacttgcatctcacgcacagtttatcacaacaaccttcagacctgaactgctg
gaatctgctgataagttttatggagtaaaatttaggaacaaggtcagtcatatcgatgtg
atcacagctgaacaggccaaggactttgtggaggatgacacgacccacggctga
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integrated database retrieval system
