Hyla sarda (Sardinian treefrog): 130281817
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Entry
130281817 CDS
T11475
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
130281817 (SHOC2)
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Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_LRWD1
LRR_9
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
130281817
NCBI-ProteinID:
XP_056385448
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Position
7:complement(17600640..17669417)
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AA seq
583 aa
AA seq
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MSSSIGKEKDPKDKDSKGPGTCKDREKEAKASGGPVKENKDKDLKTKAKDAKEGKKDAGG
AQPGVAFSVDNTIKRPSGVSGLRKKASNAEVIKELNKCREENSTRLDLAKKSIHQLPTSI
KELTQLTELYLYGNKLPSLPAEVGSLVNLVTLALSENSLTSLPDTLENLKKLRMLDLRHN
KLREIPVVVYKLSSLTTLFLRFNRLTTVEKDIKALTKLTMLSIRENKIKQLPAEIGELCN
LITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLSSLNRLGLRYNRLSAI
PRSLAKCSELDELNLENNNISTLPEGLLSSLVKVTSLTLARNCFQSYPVGGPSQFSTIYS
LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE
DVSGLVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLT
NNQLTTLPRGIGHLINLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHGLPFELAL
CSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagcataggaaaagagaaggaccccaaggataaagactctaaggggcccggt
acgtgcaaggaccgagaaaaggaagccaaggcctctggaggtcccgtgaaagaaaacaaa
gacaaggaccttaagaccaaagccaaagatgccaaagaagggaagaaagatgctggcggg
gcgcagcccggcgtggccttttccgtggacaacacgataaaacgcccctcaggcgtctcc
ggcttgcgcaagaaggccagcaatgccgaggtgataaaggaactgaacaaatgtcgggag
gagaactctacccgtttggacttggccaagaagtccattcaccagctcccgacgtccatc
aaggagctgacgcaacttacggaactttatttatacggtaacaagctgccctcgctaccg
gcggaggtgggcagcctggtgaacttggtgacgctggctcttagtgagaactctttaacc
agcttgccggacactctggagaacctgaagaagctgcgcatgctcgacttgcggcataac
aagctgcgggagatcccggtggtggtgtacaagctgagctccctcaccacgctcttcttg
cgctttaatcgtctcactactgtggagaaggacataaaggccctgaccaagctgaccatg
ctgagcatccgggaaaataaaatcaagcagctaccggcagagattggggagttgtgtaat
ctcatcacgctggacgtcgcacacaatcagctagaacaccttccgaaagagatcggcaac
tgcacccagatcaccaacctggacctgcagcacaatgagctcctggacctacccgagaca
ataggaaatctttccagcctgaaccgccttgggctgcgatacaacaggttatcggcaata
ccgcggtccttagcgaaatgcagcgagctggacgagctgaacctggagaacaacaatata
tccactttaccagagggcctcctctccagcctagtgaaagtgaccagcctcaccctggcc
aggaactgtttccagtcttaccccgtggggggtccctcccagttttccactatttactcc
ctcaatatggagcataatcgcatcaataaaatcccgtttggaattttctccagagctaaa
gtattaagtaagctgaacatgaaggacaatcagctgacgtctctacccctggactttggg
acgtggacaagtatggtagagctgaacctggctactaaccagctgaccaagatcccagag
gacgtgtccggcctggtctctattgaggtcttaatcctgtcaaacaatctgcttaagaag
cttccgcacggtatcggaaatctgcgcaaactgcgggagctggatctggaggaaaacaaa
ctggagtcactgcccaatgagattgcctatctgaaagacctgcagaaattggttctcaca
aacaaccagctgacaactttgccgagaggaatcggtcacctaataaacctgacgcacctg
ggactcggggaaaatctcctgacgcatcttccagaggaaattggtacattggagaacctc
gaggagctgtatctgaacgacaaccccaatttacacggcctgcccttcgagctggcgctg
tgcagcaagctgtcaatcatgagtatcgagaactgtcccctcagccacctccccccgcag
atcgtggccgggggtccctccttcatcattcagttcctgaaaatgcaaggtccttatcgt
gccatggtctga
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