Hyla sarda (Sardinian treefrog): 130281918
Help
Entry
130281918 CDS
T11475
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130281918 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsq03021
]
130281918 (TAF5)
03036 Chromosome and associated proteins [BR:
hsq03036
]
130281918 (TAF5)
Transcription machinery [BR:
hsq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130281918 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
130281918 (TAF5)
Chromosome and associated proteins [BR:
hsq03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
130281918 (TAF5)
STAGA complex
130281918 (TAF5)
TFTC complex
130281918 (TAF5)
SAGA complex
130281918 (TAF5)
SLIK complex
130281918 (TAF5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_WDHD1_1st
TFIID_NTD2
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
PAC11
Beta-prop_VPS8
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
DSE1_N
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_Vps41
CFAP251_N
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_Nup120_160
Beta-prop_SPT8
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Tricorn_2nd
Beta-prop_NOL10_N
ASA1
Beta-prop_ACSF4
DNAI3_WD
LisH_PAC1
Motif
Other DBs
NCBI-GeneID:
130281918
NCBI-ProteinID:
XP_056385641
LinkDB
All DBs
Position
7:74855472..74873768
Genome browser
AA seq
767 aa
AA seq
DB search
MAAVPDEASESVKTEPELLEDVKSENLGCNDNEDAVLGNGNGVSPKPPSPQAAAPAAAAM
VTPQTGSSEVPDRQTLLAVLQFLKKSNLKESADILLREAGIPDGEDKATLSPERQSEQDG
AEQTLLSRVTAGSAPLNTAPGVSANSAGVLGKGTQNNNAQDQPDVSAVLSAYTQQGDPAL
YEEYYSGLKRFIESVLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFDKFHGDQEC
YYEDDLRILASLSKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWSIV
QEHLYIDIFDGMPRSKQQIDAMVGSLSGEARREANKVKVFYGLLKEPEIEVPLDDEDEEG
ENEEGKPKKKKPKKDNIGSKSKKQDPNAPPQNRIPLPELKDSDKLDKIMIMKEAAKRVRL
GPDSLPSICFYTFLNAYQGLTAVDVTDDSSMIAGGFADSTVRVWSLTPKKLRSVKSTTDL
NLIDKESDDVLERIMDEKTASEMKVLFGHSGPVYATSFSPDRNYLLSCSEDGTVRLWSLQ
TFTCLVAYKGHNYPVWDAQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVIST
RFHPNSNYVATGSTDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFTPNGKFLASGSSDARV
LLWDIGHGLMVEELKGHTNTIYALRFSRDGEILASGSMDNTVCLWDAIKAFEDLETDDFT
SATGHINLHENSQDLLLGSYLTKSTPVTHLHFTRRNLLLSAGAYSPQ
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgccagatgaggcgagtgagtcggtgaagacggagcccgagctcctggag
gatgtgaagtcggagaacttgggctgtaatgacaacgaagatgcggtgctcggcaacggg
aatggggtctccccgaagcctccgagtccccaggctgcagccccggcagcggcggcgatg
gtcaccccccagacggggagctcggaggttccggaccggcagactctgctggccgtacta
cagttcctgaagaagagtaacctgaaggagtctgcggacatactgctccgggaggcggga
atcccagacggggaggacaaggcgaccctgagccccgagcggcagagcgagcaggacggc
gccgagcagactctgctgagccgggtcactgcggggagcgcgcccctcaacacggcgcct
ggagtgtccgccaacagcgcaggggtgctggggaaaggtacacagaataacaatgcccaa
gatcagccggatgtcagcgctgttctgtctgcatacacccagcaaggagatccagcccta
tatgaggagtattatagtggcctgaagagattcatagaatccgtcctggactgtcatcga
gctgagctgtctcagctattctaccccctgtttgtccacatgtatctggagcttgtatac
aatcaacatgaaaatgaagcaaaatcattctttgataaatttcatggagaccaggaatgt
tactatgaagatgatctccgcattttggccagtctcagtaaaaaagagcacatgaaagga
aatgagaccatgcttgactttcggacaagcaagtttgtcttgagaatatctcgagactct
taccagctattgaaacgtcacctacaggagagacagaataatcagatctggagcatagta
caagaacatctgtatattgatatattcgatggcatgccacgtagtaagcaacaaattgat
gccatggttggcagcctctctggagaagcaagaagagaggcaaacaaagtcaaggtgttc
tatggtcttctaaaagagccagagattgaggtgcctttggatgatgaagatgaagaaggg
gaaaatgaagaggggaagccaaagaaaaagaagcccaaaaaagataatattggttcaaaa
agtaagaagcaagaccctaatgctcctccccagaataggattcctctcccagagctaaaa
gattctgacaaacttgataaaattatgataatgaaggaagctgccaagcgtgtgcgactt
ggtcctgactctttaccatcaatatgtttttacacgttcctcaatgcttatcagggtctg
accgcggtggatgttacagatgattccagcatgattgcaggaggctttgctgattcaact
gtacgcgtatggagtctgacacctaaaaaactacgcagtgttaaaagcacaactgatctt
aatctgattgacaaggaatcggatgatgttcttgagcgaattatggatgagaaaactgct
agtgagatgaaagttttatttggtcacagtggtcctgtatatgcaaccagcttcagccca
gacaggaactacttactatcctgttcagaagatggcactgtccggctgtggagcctacag
acctttacttgcttggtagcctacaaaggacacaattatcctgtatgggatgcacagttc
tctccatatggttattactttgtttctggagggcatgacagggtggcacgcttatgggct
actgaccactatcagccactacgaatatttgccggccatctggcagatgtcataagtact
cgtttccatccaaactccaactatgtagccactggttctacagacaggacagtaagatta
tgggatgtgctcaatgggaactgtgtgaggatttttactggacacaagggacctattcac
tcactggcctttactcccaatggaaagtttctagccagcggcagctcggatgccagagtc
ttgctttgggacattggtcatggtttaatggttgaagagttgaagggacatacaaacaca
atctatgcacttagattcagccgcgatggagagattttagcatcaggttctatggataat
acagtctgtttatgggacgcaataaaggcttttgaagatttggaaactgatgactttaca
agtgctacaggccatataaacttgcatgaaaattcccaagacttgctgttgggctcttat
ttgacaaagtctacccctgttacccatcttcatttcacaagaagaaacctcttactgtct
gctggagcatatagcccacagtga
DBGET
integrated database retrieval system
