Hyla sarda (Sardinian treefrog): 130282732
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Entry
130282732 CDS
T11475
Symbol
KCNMA1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
130282732 (KCNMA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsq04040
]
130282732 (KCNMA1)
Ion channels [BR:
hsq04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
130282732 (KCNMA1)
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Ortholog
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GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
SR-25
Motif
Other DBs
NCBI-GeneID:
130282732
NCBI-ProteinID:
XP_056387285
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Position
7:complement(173160569..173711301)
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AA seq
1309 aa
AA seq
DB search
MASGNKSQSNFSSIGLTMSAINNNNNLHLDSIHASRGDPALIIPVTVEVPCDSRGQRMWW
AFLASSMVTFFGGLFIILVWRTLKYLWTVCCHCGGKNKEVQKVANTVSTQGNDGDCKPTD
EKEEAVAIAEVGWMTSVKDWAGVMISAQTLTGRVLVVTVFALSIGALVIYFIDSSNPIET
CQNFYKDFTLQIDMAFNIFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLN
RSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSG
DPWDDFRNSQSISYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVP
EIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHN
ISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASN
IMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCLA
QGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVSNEMYTEYLSTAFVGLSFPAVCELCFVK
LKLLMIAIEYKSEKGESRSRKRIIINPGNHVKIKEGTLGFFIASDAKEVKRAFFYCKACH
DDITDPKRIKKCACKRPKMSIRKRLMQACCLGCTEIDCSCMSGTIRSNTGTLERAFPLSP
VSVNDFSTNFRGFLLTLPCLTALPVFAVEDEQPSALSPKKKQRNGGMRHSPNSSPNMMTS
RHDPLLMAGNDQIDNMDSSSVKKYDSTGMFHWCPAKEMEKVLLTRSEAAMTVLSGHVVVC
IFGDVTSALIGLRNLVMPLRASNFHYHELKPIVFVGSLEYLKREWETLHNFPKVSILPGT
PLSRADLRAVNINLCDMCVILSANQNNIDDTSLQDKECILASLNIKSMQFDDSIGVLQAN
SQGFTPPGMDRSSPDNSPVHGLARQPSITTGANIPIITELAKPGKLLPMISFSQEKNIGT
HIPIITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNIL
TLIRTLVTGGATPELESLIAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGG
CYGDLYCKALKTYNMLCFGIYRLRDGHLSTPSQCTKRYVITNPPYEFEMVPTDLIFCLMQ
FDHNASQSRASLSHSSHSSHSSSKKSSSVHSIPASANRQNRVKARDARDKQKMNRMGQAE
KKWYTDEMENAYPRNIQIKPMSTHMANQINQYKSTSSLIPPIREVEDEC
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtggcaacaaatcccaaagcaacttcagtagcattggcttaaccatgagtgct
atcaacaacaacaacaacctgcacctagactccatccatgcatccagaggggaccctgcc
ctcattattccagtcaccgtggaggtaccatgtgacagtcggggacagcgcatgtggtgg
gcattcctggcctcttcaatggtgacattttttgggggccttttcatcattttggtatgg
aggacccttaaatatctttggacagtctgctgccactgtgggggcaagaataaggaggta
caaaaagttgcaaatacagtcagtacccaaggaaatgatggggactgcaaaccaactgat
gagaaagaagaagctgttgctattgcagaggtgggctggatgacatctgtaaaagactgg
gctggggtgatgatttcagctcagacactaacaggtcgtgtgctggtagtgactgtcttt
gctctaagcattggggcccttgtgatatatttcatcgactcatccaaccctattgaaacc
tgccaaaacttctacaaggacttcactctgcagatagatatggccttcaacatcttcttc
cttctatattttggcctgaggtttatcgctgccaatgacaagctgtggttttggctggaa
gtgaactctgtagtggatttttttacagtgcctcctgtgtttgtgtctgtttatttaaac
aggagctggctgggcttgaggttcctacgtgctctgaggctcatccagttttctgaaatc
ttgcaatttttaaacattttaaaaacaagtaattccattaagctggtgaacctttgctcc
atttttatcagtacatggttgacagctgccggcttcattcatttagtggagaactctgga
gacccatgggatgattttcggaattcacagagcatctcatattgggaatgtgtttacctg
ctaatggtgaccatgtctactgtgggatatggagatgtttatgcaaaaaccacccttggc
cgactcttcatggtcttcttcattctcggtggtttggccatgtttgccagctacgtcccc
gaaatcatagagttaataggaaaccgaaagaaatatggtggttcttatagtgcagttagt
ggacggaagcatattgtggtctgtggtcacatcactttagaaagtgtttccaacttctta
aaggacttcctccacaaagatcgagatgatgtaaacgtggagatcgtatttctgcacaac
atatcccccaacttggagctagaagctctctttaaaaggcactttactcaggtagaattt
taccagggatccgtcctgaacccccatgatcttgctagagtaaagattgagtctgcagat
gcctgcttaatccttgcaaacaagtactgtgctgatcctgatgcagaggatgcatcaaac
ataatgagagttatctcaataaaaaactatcatccaaagatacggattatcactcagatg
ctgcaatatcataacaaggcacacctgttgaatatccctagctggaattggaaagaagga
gatgatgccatatgtctggctgagctgaagctgggtttcatagctcagagttgcctagca
cagggtctgtccaccatgcttgcaaacctgttctctatgcgttcttttataaagattgaa
gaggacacatggcaaaagtactaccttgaaggagtgtcaaatgagatgtacacagaatac
ctatccaccgcctttgttgggctttccttccccgcggtttgtgagttatgctttgtgaaa
ttgaagttgctgatgatagccatcgaatacaaatcggaaaaaggggagagcagaagcaga
aagcggattatcatcaacccaggaaaccacgtgaagattaaagaaggcacgcttggattc
ttcatagcaagtgatgccaaggaagttaaacgtgcatttttctattgcaaggcttgtcat
gatgacatcacagaccccaagaggataaagaaatgtgcatgcaagcgacccaagatgtcc
atccgcaagaggctgatgcaggcatgttgtttggggtgcactgagatagactgctcttgc
atgtcaggcactatacgtagtaacacgggaacccttgaacgagccttcccactctctcct
gtctctgttaatgatttctccaccaattttcgtggcttcctcctcactctcccctgcctg
accgctttgcctgtgtttgcagttgaagatgagcagccttcagctttgtcgcctaaaaaa
aagcaaaggaatggtggaatgaggcactcccctaattcttctcccaacatgatgacgagt
aggcacgatcccttacttatggctgggaatgatcaaatagacaacatggactccagcagt
gtaaaaaaatatgactccactggcatgttccattggtgcccagctaaggaaatggagaaa
gttttattgactcgcagtgaagcagcaatgacagttctaagcggccatgtagttgtctgt
atttttggagatgtcacatctgcactcattgggcttcggaatttggtgatgccactcaga
gccagcaacttccactaccatgaacttaagccgatagtatttgtgggctccctggaatat
ctaaagagggagtgggaaacattgcacaactttccaaaggtttccattctgcctggtacg
ccattaagtcgagctgatctaagggctgtcaacattaacctgtgtgacatgtgcgttatt
ctgtcagccaatcagaacaatattgatgatacttcacttcaggacaaggaatgtatcttg
gcatctctcaacatcaaatccatgcagtttgatgacagcattggggtcttgcaagctaac
tctcaaggttttacaccaccaggaatggatcgatcttcccctgacaatagtccagtgcat
ggcctagcaagacagccatccattaccacaggggcaaacattcccatcatcactgagctt
gctaaacctggcaaactgctacctatgatttcattcagtcaggaaaaaaacattggaact
cacataccaataataacagagttggtgaatgattccaatgttcagttcctggaccaggat
gatgatgatgacccagacactgagctgtacctcacccagccttttgcttgtggcactgcc
tttgctgtaagcgtgctggattcgctcatgagtgctacatacttcaatgataacatttta
actctgatccgaacattggtgactggaggagcaacaccagagctagaatccctaatagca
gaagagaatgcattacgcggagggtatagcaccccacaaactctagctaacagggaccgt
tgtcgagtagcccagttggctctttatgacggtccatttgctgaccttggggatggtgga
tgttatggagatttgtattgcaaagcattaaaaacatacaacatgctttgctttggcatc
tatcggctacgtgatggccatctaagtacgcctagccagtgtaccaaaaggtacgttatt
acaaatcctccttatgaatttgagatggtgcccacagacctcatcttctgcctgatgcaa
ttcgaccacaatgccagccagtctcgtgccagcctctcacactcttcacactcttcacac
tcctctagcaaaaagagctcatctgttcactccatcccagcctcagctaaccgccagaac
cgtgtcaaggctcgtgacgcacgtgacaaacagaagatgaatagaatgggccaagcagaa
aagaaatggtatacagatgaaatggaaaacgcttaccccagaaacattcagattaagcca
atgagcacacatatggctaatcagattaatcaatacaaatcgacgagcagcttgataccg
ccaatccgagaggtcgaagatgaatgttga
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