Hyla sarda (Sardinian treefrog): 130282936
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Entry
130282936 CDS
T11475
Symbol
CACNA1E
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq04010
MAPK signaling pathway
hsq04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130282936 (CACNA1E)
04020 Calcium signaling pathway
130282936 (CACNA1E)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsq04040
]
130282936 (CACNA1E)
Ion channels [BR:
hsq04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130282936 (CACNA1E)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
130282936
NCBI-ProteinID:
XP_056387908
LinkDB
All DBs
Position
7:complement(190175711..191053667)
Genome browser
AA seq
2346 aa
AA seq
DB search
MVLKMLGLSSCSTSAHTLDEPDHSSPLGISTLNADTHRYVLALPEVETWRKHRLGLTQAT
HSCNLLEPDTISETLVSRTASYDALYDLRAQEAETNFPFEGHSMFEVTTGGDSDFPLSPH
VIKRRRGGLIEQKDIIKAHEAHKMQSTPQARRKEWEMARFGEAVAGRLGSGDGGSERSKT
LQGSPAAQMGTQAAFKQSKAQRARTMALYNPIPVRQNCFTVNRSLFIFGEDNIIRKYAKK
LIDWPPFEYMILATIIANCIVLALEQHLPGDDKTPMSRRLEKTEPYFIGIFCFEAGIKIV
ALGLVFHKGSYLRNGWNVMDFIVVLSGILATAGTHFNTHIDLRTLRAVRVLRPLKLVSGI
PSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHKACYRNQSAWEAMDPP
RPCGVPRCPDGYACKEWIGPNDGITQFDNILFAVLTVFQCITMEGWTTVLYNTNDALGPT
WNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQIERELNGYRA
WIDKAEEVMLAEENKNSGTSALEVLRRATIKRSRTEAMNRDTNEDHCVDISSVGTPLARA
SIKSNKMDGASYFRHKERLLRISIRHMIKSQVFYWMVLTVVALNTACVAIVHHDQAYWLS
NILYYAEFLFLGLFLVEMSLKMYGMGPRLYFHSSFNCFDCGVTIGSIFEVLWAIFRPGTS
FGISVLRALRLLRIFKITKYWASLRNLVVSLMNSMKSIISLLFLLFLFIVVFALLGMQLY
GGRFNFNDGTPSANFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVSSGMWSSIYFIV
LTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEEEAFNQKHALQKAKEVSPMSAPNASS
VENDRRKRHKMSIWEQRTSQLRRHIQMSSQEALQNEELAALNPHSSIYRKAKGLEESAGE
KVDGQEEKLGVNPGESGITGEESPSHRNLREHWKQRSKHGNAENAEQNGTTPEDAMKRRQ
SQRRSRHKKVRTEGRETSSTPNSTTTSQEGGLDKENMGDAKIHTEEKSNGEAKEVQGSEE
EPTKSCMRHCEERNDRTVGCEGTGPNTAPLQEMNHGKNGSPPDMDCSEQALLGSMQSQEE
SPNPTSCSLADVSSSTERITESTVITIPDAGMPSDCTVVQTNEERDGEVSLVSQEHGKDD
EEPEDGEERTVKRKEKLLESPKAIVPYSSMLIFSSTNPIRKVCHYIVNLRYFEMSILLVI
AASSIALAAEDPVLTNSDHNKVLRYFDYVFTGVFTFEMVIKMIDQGIILHEGSYFRDLWN
ILDFVVVVGALVAFALANVLGTNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVV
TSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSKDTEKECIGSYIDHEKNKMEV
KRREWKRHEFHYDNIIWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSRSNRMEMSIFY
VVYFVVFPFFFVNIFVALIIITFQEQGDKMMEECRLEKNERACIDFAISAKPLTRYMPQN
RHTFQYRVWHFVVSPSFEYTIMAMIALNTVVLMMKYYSAPYTYELALKYLNIAFTMLFSL
ECILKIIAFGFLNYFRDTWNIFDFITVIGSITEIILTDSKLVNTSSFNMSFLKLFRAARL
IKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIRLEEDSHINRH
NNFRSFFSSLMLLFRSATGEAWQEIMLSCLGDKGCEPDTSAASGHNENERCGTDLAYVYF
VSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWAEYDRAACGRIHYTE
MYDMLTLMSPPLGLGKRCPNKVAYKRLVLMNMPVTEDMTVHFTSTLMALIRTALDVKIAK
GGADRQQLDAELQKEILAIWPNLSQKMLDLLVPMPRSTDLTVGKIYAAMMIMDYYKQSKA
KKQRQQLEEQKNAPMFQRMEASSLPEEILSNAKALPYLQQDTLSGLGAFPSLSPLSPEEI
FQPPCLDRDDEDFEEQLSLVLSDVNSMRRSFSTTADKRARSSWLEDFTLDRSGLDSGYKQ
QRRSYHASLRLSTHRLNTDTGHRLDSHRSGGRERGRSKERKHLLSPDPSRCNSEERNPQA
ACEHRDHQLSPGHTHSTVQILDSLNEICIPSDTSTPRRGRRQLPSVPATPRPLISFSSLI
RRQKHSSPPRNGNDDIPPLPSEPGLSESSCSLQGHHSSQSTPQHYISEPYLALHEEMQSS
DCPTEDTLTFEVAVATSLGRSNTIGGAPLRQGWQMPNGHYRRRRKGGIPPVIASRELSDT
EEDDRC
NT seq
7041 nt
NT seq
+upstream
nt +downstream
nt
atggtattaaagatgctaggattaagctcctgctccaccagtgctcacacgcttgacgag
cctgaccattccagccctctaggaatatctactttaaatgccgacactcataggtatgtc
ctggccctgccagaggtggagacttggcgaaagcatcgactgggtttaacccaagctact
cactcttgcaaccttttggaaccagacactatttcggagactttggtgtcacgcacagca
agttacgatgccttgtacgatctccgtgcgcaggaggcggagactaactttccttttgaa
gggcatagcatgttcgaggtgaccactggaggagactctgactttccattgagccctcat
gtcataaagagaagaagaggaggcttgatagaacagaaggatatcataaaagctcacgag
gcccacaagatgcaaagcacgccccaagcccggcggaaagaatgggagatggctcgtttt
ggagaggcggtggctgggagattggggtccggagatggaggatcagaaaggagcaagact
ctccaagggtccccagctgcccaaatggggacccaggcagctttcaagcaatccaaagcc
caaagggcaaggaccatggctttatataaccccatccctgtccggcagaattgcttcaca
gtgaacaggtcattattcatctttggagaagacaacatcattaggaaatatgctaagaag
ctcatcgactggcctccatttgaatacatgatccttgccacaattatcgctaactgcatt
gtcctcgcactggagcagcatcttcctggagacgacaagacacctatgtctcgtagattg
gaaaaaaccgaaccctattttataggtatattttgctttgaagctggaattaaaattgtt
gctctgggactggtgttccacaaaggttcttacctccggaacggctggaacgttatggac
tttattgtagtacttagtggcattttggccacggcaggtactcacttcaatactcacata
gacctgcgtactttgcgggcagtacgtgtgctcaggccactgaaactggtctctggaatc
ccaagtttacaaattgttttgaaatccataatgaaggccatggtccctctgcttcagatc
ggattgctgcttttttttgccattcttatgtttgcaattattggacttgagttttatagc
ggcaaactgcacaaggcctgttacaggaaccagtcagcatgggaagcaatggatcctcct
cgtccctgtggagtacctagatgtccagatggatatgcgtgtaaggaatggattggaccc
aatgatggaattactcagtttgacaacatcttatttgcggtgctgaccgtcttccaatgt
ataaccatggagggctggaccacagtgctgtacaataccaatgatgccttaggacccacc
tggaactggctgtactttattcctcttattattattggatctttttttgtcctcaatcta
gttcttggtgttctgtctggtgaatttgccaaagaaagagagcgtgtggagaaccgacgg
gctttcatgaagttgcgcaggcagcagcagattgagagagaactaaacgggtatcgggct
tggatagataaagctgaggaagttatgttagctgaagaaaataaaaattctggtacttct
gctttagaagttctcaggagagcaacaattaagcgaagtagaacagaagccatgaaccga
gacacaaatgaggaccattgtgttgacatatcttctgttggcactcctcttgcaagagct
agtattaaaagtaacaaaatggatggtgcatcttattttcgtcacaaagaacgactctta
cgtatatccatacgccatatgatcaaatctcaagttttctactggatggtcttaacagtg
gtagcccttaacactgcctgtgtggccattgttcaccatgaccaagcttattggctctca
aacattctatactatgcagaattcctgtttcttggattatttttggtggagatgtctctt
aagatgtatgggatgggacctcgcctctacttccactcatcatttaattgtttcgactgt
ggggtcacaattggaagtatatttgaagtcctttgggccatatttagacccgggacatct
tttggcattagtgtcttaagagctctgcggcttttaaggatatttaaaataaccaaatac
tgggcctctttgaggaacttggtggtgtctttgatgaattccatgaagtcaattatcagc
ctgctcttcctcctattcctcttcattgttgtgtttgcactgcttggaatgcagctgtat
ggtggcagatttaatttcaatgatggcaccccttctgcaaactttgatacatttcctgca
gccattatgacggtctttcagattttaactggagaagattggaatgaggtgatgtacaat
ggtatccggtcacaggggggagtcagttctggaatgtggtcttccatttatttcatcgtc
ctcacgctatttggaaactacacacttctcaatgtatttcttgccattgctgtggataat
ttggccaatgcacaggagctgaccaaggatgagcaagaagaagaggaggcgtttaaccaa
aaacatgcccttcaaaaagccaaggaggtcagccctatgtctgcacctaatgcatcatct
gttgagaatgatcgcagaaaacggcataaaatgtccatttgggagcaacgtacaagccag
ctaaggaggcacatacagatgtccagtcaggaagctctgcagaatgaagagctggcagca
ttgaaccctcattctagtatatatcgtaaggccaaaggattagaggagtcagcaggagaa
aaagtagatggacaagaagaaaaactgggagtcaatcccggtgagagtggcattaccggt
gaagaaagcccttctcacagaaatctcagggaacactggaaacagagatctaaacatggg
aatgctgaaaatgcagaacagaatggtacaacacccgaagatgccatgaagaggaggcag
agccagagaagaagccgtcacaaaaaagttagaaccgagggccgagaaacatccagcaca
cctaacagcaccacgactagtcaggagggtggactcgacaaagagaatatgggggatgca
aaaatacatactgaggaaaaaagcaatggggaagctaaggaggtgcaaggatctgaagag
gagccaaccaagagttgcatgagacactgtgaagagagaaatgacaggacagtgggatgt
gagggcactggtcccaacactgctcctttgcaggaaatgaaccatgggaagaatggcagc
cccccagacatggattgcagtgagcaggccttactgggcagtatgcaaagtcaagaggaa
agccccaatcccaccagctgtagcttggctgatgtgtctagtagcactgagagaatcaca
gagagcacagtgatcaccataccagatgctgggatgccttccgactgcaccgtggtacag
acaaatgaagaaagagatggagaggtttctcttgtatctcaggaacatggaaaggatgat
gaggaacctgaggatggagaagaaaggacagtgaaaagaaaggaaaaacttttagagtcc
cccaaagccattgtgccatacagttcaatgcttatcttcagctctaccaacccgataaga
aaagtatgtcactacattgtgaacctgcgatattttgagatgagcatcttacttgtgatt
gctgcgagcagtatagctttagcggccgaagaccctgtgttgactaactctgatcacaac
aaggttcttcgatactttgattatgttttcactggagtcttcacctttgagatggttatt
aaaatgatagatcaaggtataattctccatgaaggctcgtatttccgtgacctctggaac
atcttggattttgtggtagtagtgggggccctggtggcttttgccttggcgaatgtcttg
gggactaacaaaggccgggacatcaaaacaattaagtctctgcgcgttctgcgagtgctg
cgtccgctcaaaaccatcaagcgtctcccaaagctgaaggcagtgtttgattgtgtggtt
acctctttgaagaacgtctttaacatcctcatcgtgtacaaactcttcatgtttatattc
gctgtcatcgctgttcaactcttcaagggcaagttcttctattgcacagacagctcaaag
gatacagagaaagaatgcataggaagttacatagaccatgagaaaaacaagatggaagta
aaacggagagagtggaagagacatgagttccactatgacaacatcatatgggccctgctt
accctcttcacagtgtccacaggggagggatggcctcaagttctgcagcattctgtggat
gtgactgaagaagatcgaggcccaagccggagcaaccgcatggagatgtccattttctac
gtcgtctactttgtagttttccctttcttttttgtcaatatttttgtggctcttatcatc
atcacctttcaggagcaaggagataagatgatggaggaatgtcggcttgaaaagaatgag
agagcctgcatcgactttgctataagtgccaagcctcttacccgctacatgccgcagaac
cgccatacgtttcagtaccgcgtgtggcattttgtggtctctccatcatttgaatacacc
atcatggctatgattgccctcaacactgtggtgcttatgatgaagtattactcggctcca
tacacgtacgagctggcattaaaatacctgaacattgcctttactatgctattttctctg
gagtgcatcctgaaaattattgcgtttggattcttgaattatttcagagacacctggaat
atttttgactttattacggtaatcggcagcatcacggagatcattcttaccgacagtaag
ttggtgaacacaagcagctttaatatgagtttcctgaagctgtttcgagctgctcgactg
ataaagcttctccggcagggttacacgattcggattctattatggacttttgtccagtct
ttcaaggccctaccttacgtctgtctattgattgctatgcttttcttcatctatgccatt
attggaatgcaggtatttggaaacatccgtctagaagaagacagccacatcaacagacac
aacaactttaggagtttcttcagttctctaatgctcctcttcaggagtgccacaggtgaa
gcctggcaggagatcatgttgtcgtgtcttggtgataagggttgtgaaccagacactagt
gcagcctctgggcacaatgagaatgaacgttgtgggactgacttggcctatgtctatttt
gtttccttcatcttcttttgctcatttctgatgttaaatctatttgttgctgtcataatg
gacaactttgaatacttgacaagagactcttccatcttgggtccgcatcatctggatgag
tttgttcggatctgggctgaatatgacagagcagcatgtggccgtatccattatacagag
atgtatgacatgctgactctcatgtcaccgccattaggccttggaaaaagatgtcccaat
aaagtggcttataagagattggtgctgatgaatatgccagtaacagaggatatgacagtg
catttcacatccacccttatggctctaatccggacagcactggatgtcaaaatagccaaa
ggtggagctgaccgacaacaactggatgcagagctgcaaaaagaaatcctggcaatttgg
ccaaatctgtctcaaaagatgttggacctacttgtgcccatgccaagatccactgacctg
accgtgggcaagatttatgctgctatgatgatcatggactattataagcagagtaaagca
aagaaacagagacaacagctggaggaacagaaaaatgcgccaatgtttcagagaatggaa
gcatcatcattacccgaggagatcttatccaatgccaaagcattaccgtacctccagcag
gatactctgtcgggcctgggcgccttcccgtcactcagtcccttgtcccctgaagaaata
tttcaaccaccgtgtctggacagagatgatgaagactttgaagagcagctgtctctggtc
ctatctgatgtcaactccatgagacgttcattctccacaacagcggataaacgtgcacgt
agctcctggctagaagacttcactttagatagaagtggtttagatagtgggtacaagcag
cagcgtcgcagctaccatgcttctctaagactatccactcatcgactcaatacagataca
ggccatcgattagactctcaccgttcaggaggaagagagaggggtcgatctaaggaaagg
aagcaccttttatctccagatccttcacgttgtaattcagaggagagaaacccccaagct
gcatgtgagcatagggatcaccagctatcacctggtcatacccatagcactgtgcagatc
cttgactcattgaatgaaatttgcattccttctgacaccagcaccccaagacgtgggcga
cgccaacttccttctgtgcctgcaaccccaagacctcttatttccttttcttctttaatc
cgtcgacagaaacacagctcacctccacgcaatggcaacgatgatataccacctcttcct
agtgaaccaggcctgagcgagtcttcctgctccctccaggggcatcacagctctcagtca
actcctcagcactatatctcagagccatatttggccctacacgaggagatgcaaagctca
gactgtccaactgaggacacactcacctttgaggttgctgtggctaccagtctaggtcgt
tctaacaccattggtggtgctccattacgacaaggatggcagatgcccaatggtcactat
cgtcgtagaagaaagggaggaataccacctgtgatagcctctcgtgaattaagtgacaca
gaagaggatgatcgttgttaa
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integrated database retrieval system
