Hyla sarda (Sardinian treefrog): 130283460
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Entry
130283460 CDS
T11475
Symbol
PIF1
Name
(RefSeq) ATP-dependent DNA helicase PIF1 isoform X1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
hsq Hyla sarda (Sardinian treefrog)
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsq03032
]
130283460 (PIF1)
03029 Mitochondrial biogenesis [BR:
hsq03029
]
130283460 (PIF1)
Enzymes [BR:
hsq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
130283460 (PIF1)
DNA replication proteins [BR:
hsq03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
130283460 (PIF1)
Mitochondrial biogenesis [BR:
hsq03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
130283460 (PIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
PH_LRR1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
Herpes_Helicase
UvrD_C_2
Mg_chelatase
AAA_7
PhoH
AAA_16
ABC_tran
RsgA_GTPase
AAA_5
NACHT
Motif
Other DBs
NCBI-GeneID:
130283460
NCBI-ProteinID:
XP_056388988
LinkDB
All DBs
Position
7:complement(229668052..229681883)
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AA seq
649 aa
AA seq
DB search
MRGSIAKICKYRKMNVTNHLSAEIQSSVTIEYLNSSGQAMKRKVIRNAFTSLGRNEFREL
VLKVSDGKLPQNFILKQIQIFTRFIRDGKSSIVLQPENIQLLISNCPSDQLKHFMKTLMI
KHEAAKSKKPVNERMRLLSGLPRMFETISPVQKKDVEQANEMRAKVNNQTPLKGKGLSNR
GGNGANRCQQKRPRTESSENSLISELRPSKKPALSMPRQLQLSTEQSTILSTILSGRNVF
FTGSAGTGKSYLLKRIVGALPPKSTYATASTGVAACHIGGTTLHAFAGIGSGKAPLEQCI
ELAKRPGVRQHWISCRHLIIDEISMVEGEFFDKLEAVARAVRGKDEPFGGIQLIVCGDFL
QLPPVTQASSQTKFCFQAKSWRRCIHLTMELTAVRRQTDKRFISLLQAIRLGRCTEEVTR
QLLLTVNNKIERDGILATRLCTHKDDVDLTNDRRLQQLPGEMQQYDALDSDPMLVKTVNA
QCPVGEKILLKKGAQVMLTKNLDVARGLVNGARGVVVGFDGAGKPLPKVRFLCGVTEVMK
PERWVIKANGGVFLSRQQLPLKLAWAISIHKSQGMTLDCVEISLSRVFESGQAYVALSRA
RNLEGLRVMDFDPKAVNANPYVLQFYARLKKERALYQTSLDPFVVDKEN
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaggggttcaatagccaagatttgtaaatataggaagatgaatgtgaccaaccacttg
tccgcggagatccagagcagcgtcaccattgaatatctgaactcctccggacaggccatg
aagcgtaaggttatccgtaacgccttcacctcgctgggacgcaatgagttccgggagctg
gtgctgaaggtcagtgacgggaagttacctcagaacttcatcctgaagcagatccagatc
ttcacccgcttcatccgagatggtaaaagctccatcgtgctgcagccggagaacatccaa
ctgctgatctctaactgcccctccgaccagctgaagcatttcatgaagaccctgatgata
aaacacgaagcggcgaagagcaagaagccggtgaatgagcgcatgcgcctgctgtcaggg
ctcccacgtatgtttgagaccatcagccccgtacagaagaaggacgtggagcaggcgaac
gaaatgcgagcaaaagtcaataaccagacgcctctgaagggcaaagggctgagtaaccgg
ggagggaacggcgcgaaccgatgccaacagaaacggccgaggacggagtcatcagagaac
agtctgatttcggagctccgccccagtaagaagcccgctctgtctatgccccggcagctg
cagctctccaccgagcagtccacgattcttagcaccatcctgagcgggaggaacgttttc
ttcacgggaagcgcaggcacagggaagtcgtacctcctgaagaggattgttggggcgctg
cctcctaaaagcacttatgccaccgcgagtacaggggtagcggcctgtcacatcgggggc
accacactacacgcttttgcagggatcggttcggggaaggctcctctggagcagtgtata
gagttggccaagaggccgggggtccgtcagcactggatcagttgccgacacctgatcatc
gacgagatctctatggtggaaggggaattcttcgacaagctggaggccgtggccagggcg
gtccgcgggaaggacgagccctttggtgggatccagctcatcgtctgcggagatttcctg
cagcttccgccggtgactcaagcctcaagtcagacaaagttctgcttccaggccaaaagc
tggaggagatgcatccacctgaccatggagctgacggcggtgcggagacagaccgacaag
aggttcatctctctgctgcaggccattcgtctgggcaggtgcacggaagaggtgaccaga
caactcctactgaccgtcaacaacaagatcgagcgggacgggatcctggccacccggctg
tgcacccacaaggacgacgtagacctgaccaacgatcggaggctacagcaactacctggg
gagatgcagcagtacgacgccctggacagtgacccgatgcttgtgaagactgtgaacgcg
cagtgtccggtcggggagaagatccttctgaagaaaggtgctcaggtgatgctgaccaag
aatctggacgtcgctcgcggtttggtgaacggcgcgcgaggagtcgtcgttgggttcgac
ggagccggaaaacctctgcccaaagtccgtttcctgtgcggggtcacggaggtcatgaag
ccggagcgctgggtcatcaaagctaatggtggggtcttcctgagtcggcagcagttgccc
ctgaagctggcctgggccatctccatacacaagagtcaggggatgacgctggactgtgtg
gagatctccctgtcccgtgtgtttgagagcggccaggcctacgtagcgctctccagggct
cgcaacctagaggggctccgggtcatggacttcgatccaaaggcggtgaatgcgaaccca
tatgttctccaattctatgccagactgaagaaggagcgagcgctgtaccagaccagtctg
gatccttttgttgtggataaggagaattga
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