Hyla sarda (Sardinian treefrog): 130283509
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Entry
130283509 CDS
T11475
Symbol
PTCH2
Name
(RefSeq) protein patched homolog 2 isoform X1
KO
K11101
patched 2
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
130283509 (PTCH2)
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Paralog
GFIT
Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
130283509
NCBI-ProteinID:
XP_056389090
LinkDB
All DBs
Position
7:233742221..233815777
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AA seq
1415 aa
AA seq
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MASVPPSTGERGFTDLPPGYKTSYPAPGSDLLRRPSYCHAAFALKQISKGKAVGQKAPLW
LRAQFQSLLFSLGCSIQRHCGKVLFIGLLVFGALAVGLRVASIETDIERLWVEAGSRVSQ
ELSYTKEKMGEESVYTSQMLIQTPKTEGENILTQEALMLHLNAALAASKVQVSMYGKSWD
LNKICYKSGVPIIENGMIERMIEKLFPCVIITPLDCFWEGSQLQGGSAYLPGRRDIQWTN
LDPIKLMEELSQFTSLDGFKEMLDKAEVGQAYMERPCLDPTDSECPESSPNKKSQEIPDI
VATLKNGCHGFSKKFMYWQKELILGGMTKGTSGELKSAEALQTMYLLMSPGQLYEHFKDD
YEIHDINWNEEKAAAILESWQRKFVEQAQQSIPQNASQDIHAFSTTTLNDIMKSFSDVSA
IRVAGGYLLMLAYACVTMLRWDCSKSQGAVGLAGVLLVALSVASGLGLCSLLGISFNAAT
TQVLPFLALGIGVDDMFLLAHTFTETGLSTPSKERTGECLRRTGTSVALTSINNMIAFFM
AALVPIPALRAFSLQAAIVVVFNFAMVLLIFPAILSLDLQRRKDQRLDILCCFYSPCSSR
VIQIQPQEMADANDNHTYHPSSYGNPTITTSTHITTTVQAFTQCDSSGHHVVTILPPTSQ
ISTLPSVIVPTVDPLGSQVFSPSSSTRDLLSQLNETKGSRECVPLPFLKWSLSDFAREKY
APLLLKPEMKGIVVALFMALLGLGLYGTTMVHDGLYLTDIVPRETKEYNFISAQFKYFSF
YNMFIVTKGGFDYPKAQASLYELHESFGSVKYVVREEGRDLPKMWLHYFQDWLRGLQDSF
DKDWQSGHITQDNYRNGTEDAILAYKLLIQTGNKKDPFNFDQLTSRRLVDENGLIPQDAF
YIYLTVWVSNDPLGYAASQANFYPQPPEWIHDRYDNTGENLRIPSAEPIEFAQFPFYLNG
LRQTSDFIEAIESVRSVCKEFVEQGVYSYPSGYPFLFWEQYIGLRHWFLLAISIVLACTF
LVCALLLLNPWTAGIIVFILAMMTVELFGIMGLIGIKLSAIPVVILIASVGIGVEFTVHV
ALGFLTAIGDRNQRSILALEHMFAPVLDGAISTLLGVLMLAGSEFDFILRYFFAVLTILT
ILGLLNGLVLLPVLLSLIGPPAEVTPADNSNCLPTPTPEPPHLNHHAFYMQRKVAGRGGF
SDPEDSSEYYSETTATSGMEEDDPQLYERSPYIIPPKHSHILLEASKSPSYPKIMLVKPC
KGESQGEAPQDSTNRTAPAQDPNRNNGQDTKDSQEPKDWRKFHQGSAWAKQPPSSRTQYS
SRPQGHRTTPPVYCTQMTGPSGSITTVTATASVTVAVHPNLPGAVRTYSHEGYEDNDVDC
TEYRPKWARSKNPHPEVFELEDLEQNRSAERTSVH
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgtacccccctccacgggggaaagaggctttacagatttacccccgggctac
aaaacttcttacccggctccgggatcggatctgctgcggagacccagttactgtcacgct
gcctttgcacttaaacagatatctaagggtaaagcggtaggtcagaaggctccgctctgg
ctccgcgctcagttccagtccctgctcttctccttgggatgctccatccagcggcactgc
gggaaggtgctgttcattggcctgctggtgttcggagcgctggccgtcggcctccgagtg
gcttctattgagaccgacattgaacgactatgggtggaagcgggaagccgagtgagccaa
gaactcagctacacgaaagagaagatgggcgaggagtctgtctacacctcccaaatgctc
atccagaccccaaagacagaaggcgaaaatatcctgacccaagaggctctaatgctgcac
ctcaatgctgcgctggctgctagcaaagtgcaggtctcaatgtatggaaagtcgtgggat
ctgaacaagatttgctacaagtccggcgtcccaataatcgagaacgggatgattgagcgg
atgattgagaagcttttcccctgcgtcatcatcactcccttggactgtttttgggaaggg
tcgcagctgcagggaggctccgcctatttaccgggaaggagagatattcagtggacaaac
ctagaccccattaagttaatggaggagctcagccaattcaccagccttgacggcttcaaa
gagatgctggacaaggccgaggtggggcaggcgtacatggagcggccttgtctggacccc
acagattccgaatgtccagaaagttcccccaacaagaagtcacaggagatcccagacatt
gtcgccaccctgaagaatggctgccacggcttctctaagaagtttatgtactggcagaag
gagctgattctgggcggaatgacaaaaggaaccagcggagagttaaagagtgctgaagct
ctgcagaccatgtacctcctgatgagtccagggcagctgtacgaacacttcaaagatgac
tatgaaatccatgacatcaactggaacgaagagaaggcagccgccatcttggagtcatgg
cagcgaaagtttgtggagcaagcgcagcagtccatccctcagaacgcctcgcaggacatc
cacgccttctccaccaccaccctgaacgatatcatgaagtccttctctgatgtcagtgcc
atccgtgtggccggtggatacctgctgatgctggcttatgcctgtgtcacaatgctgcgc
tgggattgttccaagtcccaaggagctgtgggtctggctggcgtccttcttgtggctctc
tctgtggcatcggggttgggactttgctcccttcttggcatctccttcaacgctgcaaca
acccaggtactgccgtttcttgcactgggcataggtgtggacgacatgttcctgctggca
cacacgttcacagagaccggcctgagtactccatcaaaggaaaggacgggtgaatgcctg
agacgcacgggcacaagtgtggcgcttacttctatcaataacatgattgctttcttcatg
gccgctttggttcctatcccagcattgcgggcattctccttgcaggctgcgattgtagtt
gtgttcaattttgcgatggttttgctcatatttccggccattttgagcttggatctccag
cgtagaaaggatcagcggctggacattctctgctgcttctacagcccgtgttcctccaga
gtgatccagattcaacctcaagaaatggctgacgccaatgacaatcacacctaccatcca
tcgtcttatgggaaccccactatcaccaccagcacccatatcaccaccaccgtccaggcc
ttcacccagtgtgactcctccgggcaccacgtggtcaccatcttaccaccaacctcccag
atctccaccttgccctctgtcattgtccccactgtggatccattggggtctcaggtcttc
agtccctccagctccactcgggatttgctgtctcagctgaatgaaaccaaaggaagtcgc
gagtgcgtccctcttcccttcctgaagtggagcctgtcggattttgcccgcgagaagtac
gccccgttattgctgaagcccgaaatgaaggggatcgtggttgccctcttcatggccctt
ctaggcctcggcttgtatggaaccacaatggttcacgacggtctctacctcacagacatt
gttcctcgggagaccaaggagtacaactttatctcagcacagttcaaatatttctccttc
tacaacatgttcattgtcactaagggcggctttgactaccccaaggctcaggcgtccttg
tatgaacttcacgagtccttcggatcagtcaagtatgtcgtccgcgaggaaggaagagac
ttacccaaaatgtggctgcattatttccaggactggctgagaggcctccaggattctttt
gataaggactggcagtccggacacatcacgcaggacaattaccgtaacggcacagaagac
gccatcttggcctataaactcctcatccagacagggaacaagaaggatccctttaatttt
gaccagctgactagtcggcgactggtggatgagaacggtttaattcctcaggatgctttc
tatatctacctaaccgtgtgggtcagcaatgatcccctgggctacgccgcctcacaggcc
aatttctaccctcaacctccagaatggatccatgaccgatatgacaacactggagaaaat
ctaagaattccctcggcagagccaattgaattcgctcagtttcccttctacctgaacggt
ctgcgccagacgtctgactttattgaagccattgagagcgtgcgctcggtctgcaaggag
tttgtagagcagggggtgtacagctaccccagcggataccccttcctcttctgggagcag
tatatcggcctgcgtcactggttcctcctcgccatcagcattgtcctggcgtgtacgttt
ttggtgtgcgctctcctcctgctcaatccgtggacggccgggataattgttttcatcttg
gctatgatgacggtggagttgtttggcatcatgggactgatcggcatcaagctcagcgcc
atccctgtggtcatcctcatcgcctctgttggcatcggagtggagtttacggtccacgta
gctttaggatttctcacagctattggtgaccggaaccagcgctctatacttgccctagaa
catatgttcgcccccgttctggatggcgccatatccactcttctcggggtgctgatgctg
gcaggatccgagtttgactttattttaaggtatttcttcgctgtgctcacaattctcacc
atcttggggctgctgaacggcctggtgctgctcccggtgctgctgtccctgatcggaccc
ccggctgaggtgactcccgcagacaacagtaactgcctcccgacacccacaccggagccg
ccgcatctcaatcaccacgccttctacatgcagcgcaaagtcgcgggacgagggggcttc
agtgaccccgaggactcctcagaatattactccgagaccaccgccacctcaggaatggag
gaggatgatccgcagctctatgagcgaagcccgtatatcatcccacccaaacattcacac
atcctcctagaagccagcaagagcccctcgtaccccaaaattatgttggtaaagccctgt
aagggggaaagccaaggagaagcccctcaggacagcaccaacaggaccgcgcctgcccag
gatccaaacaggaacaacgggcaagatacaaaggactctcaggagccgaaagactggaga
aagtttcaccaggggtctgcgtgggccaagcagccccccagctccaggactcagtacagt
agtaggcctcagggccacagaactactcctccagtctactgtacacagatgacgggcccc
agcggctccatcaccactgtgaccgccacagcctcagtgactgtcgccgtacatccaaac
ctgccaggagccgtgcggacttacagccacgagggctacgaggacaatgatgtggactgt
acagagtacaggcccaaatgggccaggagtaaaaacccacacccggaggtgttcgagctg
gaagatctggagcagaaccgaagcgcagagagaacatctgtacactag
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