Hyla sarda (Sardinian treefrog): 130283972
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Entry
130283972 CDS
T11475
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq04010
MAPK signaling pathway
hsq04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130283972 (CACNA1H)
04020 Calcium signaling pathway
130283972 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsq04040
]
130283972 (CACNA1H)
Ion channels [BR:
hsq04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130283972 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
TMEM208_SND2
Motif
Other DBs
NCBI-GeneID:
130283972
NCBI-ProteinID:
XP_056389768
LinkDB
All DBs
Position
8:214943548..215474893
Genome browser
AA seq
2476 aa
AA seq
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MTDGERREPFQPLAGDDIRVPIPPMPPAGDPGEEEDGGSPEKSAPGSLGSGEPSSRSQEQ
GQGSEEGEQVPYPALAPTVFFCLKQTTRPRSWCLKLVCNPWFEHFSMLVILLNCVTLGMF
QPCEDVECLSERCSILEAFDGFIFAFFAVEMVIKMIALGIFGQKCYLGDTWNRLDFFIVM
AGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFV
FFIFGIVGVQLWAGLLRNRCFIDQDIITSYNLTSLRPYYQVDDTEDNPYICSSHRDNGML
KCQDIPPKIDCSNFNFPEFGSRNNCDLNQFYNVCKPGEVNPHKGAINFDNIGYAWIAIFQ
VITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRENQLM
QEQRARYLSNDSTIASFSEPGSCYEELLKYICHIFRKVKRRTLRLYNNWQNKRRKKVNPN
STMNGEGRGRKCKRRITSIHHLIHHHHHHHYHITNGSPRGPRSSPEICDVEMKIMKPKSQ
LRLLPPSPGHQNTSPSSESVHSIYHADCHFEGHQLKSCKSSNASSHTKLDVGLNHTNMNY
PTIMPSPTSKTSPSTLPKGKGRSGSTPASLMNSPVNLNAESYGKIQQLVGEHGLCRSNSK
LSSLSVPCSLPSPQPSQIICELQNCVYCANILENPELEFTDSDSCESDTNGVYEFTQDLR
HGDQRDHVQKGKTLKQKEKEVNKICKLWQEFTNRLKRIVDSKYFNRGIMIAILINTLSMG
IEYHEQPEELTNALEISNIVFTSMFALEMLLKLLAFGIFGYIKNPYNIFDGIIVVISVWE
IIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSI
LGMHLFGCKFTLRTDNGDTITDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWA
ALYFVALMTFGNYVLFNLLVAILVEGFQAEGDATRSETDEDKVSTNLDEDLEKLKDLRAT
ELKMYSLAVTPNGHLDPRCAMPPPLIMRTAATPMPTPKSSPCMDSVHTFVDSRRGSNVSM
DPSVCDQKSLASVRSSPCPPWGTYSNWGSRRSSWNSLGRAPSIKKRSQTGERESLLSGEG
KGSTDEDSDDCKSSSVGRISLHRRAGSLDTRGSFDIPELLQVPTLRHSLSVSPLAMVPAD
YQDCNGKMVHVPSELFVRVEKHKEDPVDYEDDLEDSYCFRLRKMLEPYKPKWCKTHEDWS
LYIFAPQNQFRMMCQKVIAHKMFDHVVLVFIFLNCITIALERPDINPNSMERIFLSVSNH
IFTAIFVVEMTIKLVALGFFSGEHAYLQSSWNVLDGVLVFVSIIDIIVSLASAGGAKILG
ILRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFFIIFGILGVQLFK
GKFYSCEGLDVRNVTNRSECVGPRNKWVRRKYNFDNLGQALMSLFVLSSKDGWVNIMYDG
LDAVATDVQPVRNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEEARRR
EEKRQRRLEKKRRSKALYMSEAQRRPYYADYSPTRKYIHSMCTSHYLDLFITFIIGINVI
TMSMEHYNQPKSLEEALKYCNYVFTIVFVFEALLKLVAFGFRRFFKDRWNQLDLAIVLLS
IMGITLEEIEINASLPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNL
GLLFMLLFFIYAALGVELFGKLVCNEENPCEGLSRHATFENFGMAFLTLFRVSTGDNWNG
IMKDTLRECNSEDKNCLSYLPLISPVYFVTFVLIAQFVLVNVVVAVLMKHLEESNKEAKE
DAEMDAEIELEMSRAVTPVCPIVPPTLDGKAIVGGPGSMKRELPVLLKQARGALSHENVT
LLIPDTLDGSILRKEKRPGSPVPCQQAFPLALLPCSYGPEDGDVYRRDGTGSQNLLTVKK
VSVSRMMSLPNDSYMFRPVLPAKSSYPLREVMAYENSHPEESLLSVHSQPTESGNSLKTP
VDRQPLPSPSCHVDAEDMPKIPPPRPASRSPSLNRLLRRQVTEAVHMDSVDFQNGESKDN
LQLESSETSKLKTPSPNNLVPNLLCPMPLSRQGTPQTSPKLSPHHRHSSVRTRKHTYSQH
SIPSRPSSMSSDNTNPDESTLESSDPADEEVSHINSLATGWIGQSNHRSHSVSPFISQVS
SPPPSPPLLKNCNSTFSLVGTSSKDLKKFYSVDTQGFLAKPIWAEDQRRHSIEICPSIDD
DGDSCFDLSMDDKHDSSILIRSDPEYINGVRRKKKMSPPCISIDPPMEEENGTASRTKAS
ENSMMLRRRTPSCESTAYRDSLDLSDSQAVEQQSKAERRTQAPCRNEHLVIPGYSFDQLE
SNSFSELLTEGGSTSPSVVIIDSRPDTGALEIKQLDHLHSNNSDKNRDFTEIKSSLKNPA
LVDASNTSGEVTDKPL
NT seq
7431 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgagagaagagagcctttccagccgctggccggagatgacatcagggtt
cctataccccccatgccaccggcaggggaccccggtgaagaagaagatgggggtagtcca
gagaaatcagctccgggaagtttgggctcaggagaaccttcgagcagaagtcaggaacaa
ggtcagggctccgaggaaggtgaacaggtgccgtacccagcgttggctcctactgtattc
ttctgtcttaaacaaaccacccgtccacgcagctggtgtctgaagctggtctgtaacccg
tggtttgagcacttcagcatgctggtcattttgctgaattgtgtcaccctcgggatgttc
cagccttgtgaagatgtggagtgtttgtcggagagatgctcaatccttgaggcatttgat
ggcttcatcttcgctttctttgcggtggaaatggtcattaagatgatagcattgggcatc
tttgggcagaagtgttacctgggagacacgtggaacagactggatttttttatcgtcatg
gctgggatgatggaatactctctggacggacacaacgtcagcctgtctgccatccgcact
gtccgagttttaaggccgctaagagccattaatagagtcccaagtatgagaatactggtg
accctgctgttagatactctgcctatgttaggcaacgtccttctcttgtgtttctttgtg
tttttcatcttcgggattgtcggcgtccagctctgggcgggtttactccgaaaccggtgt
ttcatcgaccaagatattataaccagctacaatctcacctccctgaggccgtattaccag
gtggatgatacggaggataacccgtatatctgctcatctcaccgagacaacgggatgctg
aagtgccaggacatcccccccaaaatcgactgctccaacttcaacttcccagaattcggc
agcaggaacaactgcgatctgaaccagttctacaacgtatgcaaacccggagaagtcaat
cctcacaaaggggccattaattttgataacattggctacgcctggatagccatatttcag
gttataaccctggaagggtgggtggacatcatgtactatgtcatggatgcacattctttt
tacaattttatatattttatactacttataatagtgggttctttcttcatgataaacttg
tgcctggttgtgatagcaacacagttttctgaaacaaaacagcgggagaatcagttaatg
caagagcagcgggctcgatacctctccaacgacagcacaatcgccagcttctccgaaccg
ggaagttgctacgaggagttactaaagtacatctgccacatctttaggaaggtcaagagg
cggactctaaggctatataataattggcaaaacaagcggaggaaaaaagtcaaccccaat
agtaccatgaatggagagggccggggccgcaagtgcaaacgaaggattacttcaatccac
catctaattcaccatcaccatcatcatcattaccacataactaacggtagtcctcgtgga
cccaggtcaagtcctgagatatgtgatgtggagatgaagatcatgaagccaaaaagtcag
cttagacttcttcctccttctcctggtcatcaaaacacatcacccagtagtgagtccgtc
catagcatctaccatgcggattgccactttgaaggacaccagttaaaatcctgtaagtct
tccaatgcttcctcacacaccaaactggatgttgggctcaaccacaccaacatgaattat
cccaccatcatgccttcccccaccagtaaaaccagtccctctaccttgccaaaagggaaa
ggaagaagtggaagcactccagccagcttgatgaatagcccggtcaacctgaatgccgag
tcctatggaaagatccagcagctagttggagaacacggcctctgcagaagtaacagcaaa
ttatcaagtctgagtgtcccctgttccttgccgagtccccagccgagtcagatcatctgc
gagctccagaactgtgtatactgcgccaatattctggaaaatcccgaactagaattcacc
gactcagatagctgcgagtcggacaccaatggagtgtatgagttcacgcaggacttaagg
catggagaccaaagagatcacgtgcagaaagggaagacgctcaaacagaaagagaaagag
gtgaataagatctgcaaactctggcaggagtttaccaatcggctaaaaaggattgtggac
agcaaatacttcaaccgggggatcatgatcgccatcttgataaacaccctcagcatggga
atcgagtatcatgagcagccggaggagctgaccaacgccctggagatcagtaacatcgtc
ttcaccagcatgttcgccctggagatgctcctcaaactcctcgcttttgggatctttgga
tacattaagaatccgtacaacatctttgatggaattattgtcgtcatcagtgtttgggag
atcatcggccagtcagatgggggtctgtctgtgctcagaacattccggctgcttcgcgtg
ttgaagctggtccgcttcatgccagctctgcgccgccaactggtggtcctgatgaagacc
atggacaatgtggccacgttctgcatgcttctcatgctcttcatctttatcttcagcatt
cttggcatgcatctctttggttgtaagtttacgttgaggacagacaatggagacaccatc
acagacagaaagaactttgattcccttctttgggccattgtgacagttttccagattcta
acccaggaagactggaacgtggtcctgtataatggaatggcctccacttcctcctgggca
gctctttactttgtggctctgatgacatttggaaattatgtcctgtttaatctcttggtg
gccattctggtggaaggctttcaggcagagggggatgccacaaggtcagaaaccgatgag
gacaaagtctccaccaacttagatgaagatttggaaaagctgaaggatctgcgagctaca
gagttgaagatgtattcacttgcagtcacccctaatggacatctggatccccgctgtgca
atgcctcctcccctcatcatgcgcacagctgccacccccatgcccaccccaaagagctct
ccatgcatggactccgtacacacatttgtggattcgagaaggggaagcaatgtgtcgatg
gatccatcggtctgtgatcagaagtctctggccagtgttcgaagctccccatgtccacct
tggggcacctacagtaactgggggagtcgccgctccagctggaacagcctaggtcgggca
ccaagcattaagaagagaagccaaactggggaaagagagtctctactctccggggagggc
aagggcagcactgatgaggattctgatgactgcaagtccagctcagtaggcaggatatcc
ctccatcgccgggcaggatctctggacactcggggttcttttgacattccagagctccta
caggttcccactttacgacactcactcagcgtcagccctttggccatggtgcctgcagac
taccaagactgcaatggaaaaatggtgcacgtgcccagtgaactgtttgtgagagtggaa
aagcacaaggaagaccctgtggactatgaggatgatctcgaagatagttactgtttccgt
ctccgcaagatgctagagccttacaagcccaagtggtgcaaaacccatgaagactggtca
ctttacatatttgctcctcaaaatcagttccgaatgatgtgccaaaaggttattgcccat
aagatgtttgaccacgtggtgctcgtcttcatcttcttgaactgcatcaccattgcctta
gagagaccggacataaacccaaacagtatggagcggatatttctgagtgtttccaatcac
atctttacggcgatctttgttgtggagatgaccattaagctggtcgccctgggcttcttc
tcaggagagcatgcctatcttcagagtagctggaacgtactggatggagtcctggtgttt
gtctctatcattgatatcattgtgtccttagcatcggctggaggtgccaagatcttgggg
atccttagggtgttgaggcttctccggaccctacgcccattaagggtcatcagcagagca
ccggggctgaaactggtggtggaaacgttaatttcctctcttcgacccattggaaatatt
gtccttatctgctgcgcgtttttcatcatttttgggattttgggagtccagcttttcaaa
ggcaaattctattcctgcgagggcctagatgtccgcaacgtcaccaacagatctgaatgt
gtggggccacgcaataagtgggtgagacgcaaatacaacttcgataaccttggccaggcc
ctcatgtcgctttttgttctgtcatccaaagatggctgggtgaacattatgtacgatggg
cttgacgcagtggccaccgatgtacagccagtccggaaccacaacccatggatgttgcta
tacttcatctcattccttcttatcgtcagcttctttgtgcttaacatgttcgttggagtg
gtggtggagaacttccacaagtgccgccagcaccaggaggccgaggaggctcgtcgtagg
gaggagaaacggcagcggcgcctagagaaaaagcgcaggagtaaggcgttgtatatgtct
gaggcccagaggagaccttattacgctgactactctccaactcggaaatatatacactca
atgtgcaccagccactaccttgacctgttcatcaccttcatcattggtatcaatgttata
accatgtctatggagcactacaaccaacccaagtccctggaggaggctttgaaatactgt
aactatgtcttcaccatcgtctttgtgttcgaagctcttctcaagctggttgcctttgga
tttagaagattctttaaagacaggtggaaccagctggaccttgctattgtgctgctctcc
atcatggggatcacactggaggagatcgaaatcaacgcctcccttcccatcaatcccacc
attatccgtatcatgagggtgctgaggatcgcccgagtgctgaagcttttgaagatggcc
acgggaatgcgagctctgctggatacagttgtccaggccctgccacaggtaggaaacctt
ggacttctcttcatgctcctgttttttatctacgccgccctgggagtggagctgttcgga
aagcttgtgtgcaatgaagaaaacccctgcgagggtctcagcaggcatgccacattcgag
aactttggaatggctttcctgacgcttttcagagtgtcaacgggagacaactggaacggt
ataatgaaggacacactccgcgaatgtaacagtgaggacaagaactgcctcagctacctg
cccctcatttccccggtctattttgtcaccttcgtcctcatcgcccagtttgtcctagtt
aatgttgtggtggccgttctcatgaagcatctagaggaaagcaataaggaggccaaagaa
gacgcagagatggatgcagagattgagttggagatgtctagagcggtcactccagtctgc
cccatagtcccgccgaccttagatggcaaggcaattgttggtggtccagggtcaatgaag
agagaactaccagtgctgctgaaacaagccaggggggcactgagccacgagaatgtgact
ctattgattcctgatacactggatggttcaattctgaggaaagagaaaagaccaggctcc
cctgtgccctgtcagcaggcctttccacttgccctcctgccctgcagctatgggcctgag
gatggtgatgtctacaggagggatggaaccggatcccaaaacctgctgacggtcaaaaag
gtttccgtgtccagaatgatgtccttgcccaatgacagctatatgttccgtcctgttttg
ccagcaaagtcatcatacccccttcgggaagtaatggcctatgagaacagccacccagaa
gaatcacttctgtcagtccattcccaaccaactgaatctggcaactctctgaaaacacct
gtggaccgacagcctctgccatcaccgagctgccatgtggatgctgaagacatgcctaaa
attccacctccacgccccgcctccagatcacccagtctgaacagattgctgcgacggcag
gtaacggaggccgtacacatggattcagttgactttcagaatggggaatccaaggataac
ctacaactcgaatcgtcagaaacttccaagctgaaaacgccttcacctaataaccttgtt
cctaacttgctctgcccaatgcccttatctcggcagggaaccccgcaaacttctcccaaa
ctatctccccaccacagacattccagcgtccgtactcgcaagcatacgtatagccaacac
agtattcctagtcgtccttcaagcatgagcagtgacaacacgaacccagacgagtctacg
ctcgagtcctcagatccagccgatgaagaggtaagccacataaacagcttggccactggt
tggataggacagtccaaccatcgaagtcactcagtttctccattcatctcccaagtttca
tctcctcctccttctcctccactacttaagaactgcaatagcacattcagcctggttggg
accagcagcaaagacttgaagaagttctacagtgttgatactcaaggatttttagcgaag
cccatatgggcggaagaccaaaggaggcactcgatcgagatctgcccctccatcgatgac
gatggagattcctgctttgatctatccatggatgacaagcatgactcttctattctcata
cggtccgacccagagtacatcaatggggttcgaaggaagaagaagatgagcccgccttgt
atttctatagatcctcccatggaggaagagaacggcacagcttcacgtaccaaagcatcg
gagaacagcatgatgttacggaggcggacaccttcgtgtgaatccaccgcatacagggac
tctttagaccttagtgacagccaagctgtagagcagcaatcgaaagccgagaggcggacc
caagcaccttgtcgcaacgaacacttggtcattccaggctattctttcgaccagctggag
tcaaacagcttctctgaacttttaaccgagggtggatcaacttctccatccgtggtcatt
atagactccaggcctgacacgggggcgttagaaattaagcaactagaccatcttcatagt
aacaattctgacaagaacagagattttacagaaattaagagttctttaaaaaaccctgca
ctagtcgacgcttctaacacatcaggcgaagtgacggacaaaccgttatag
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integrated database retrieval system
