Hyla sarda (Sardinian treefrog): 130284797
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Entry
130284797 CDS
T11475
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic isoform X1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq00260
Glycine, serine and threonine metabolism
hsq00630
Glyoxylate and dicarboxylate metabolism
hsq00670
One carbon pool by folate
hsq01100
Metabolic pathways
hsq01200
Carbon metabolism
hsq01230
Biosynthesis of amino acids
hsq01240
Biosynthesis of cofactors
hsq04981
Folate transport and metabolism
Module
hsq_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
130284797 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
130284797 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
130284797 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
130284797 (SHMT1)
Enzymes [BR:
hsq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
130284797 (SHMT1)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
130284797
NCBI-ProteinID:
XP_056391537
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Position
8:216169877..216224198
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AA seq
542 aa
AA seq
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MQQRQQNRKSMVVVVRGHWFMRRTNFPPVLQLATMYQCIQIENVSKTGYNWLGVQDLMMA
DSTMINGAHTDLWASHNQMVLEPLETNDPEVYEIIRKEKHRQRYGLELIASENFASCAVL
QALGSCLNNKYSEGYPGQRYYGGTEHVDELERLCQKRALETYSLDPQKWGVNVQPYSGSP
ANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYID
YDRLEENARLFHPKLIIAGVSCYSRNLDYGRMRAIANENNAILMADMAHISGLVAAGVVP
SPFEHCDIVTTTTHKTLRGCRAGIIFYRKGVRSVDPKTGKDILYNYESLINQAVFPGLQG
GPHNHAIAGIAVALKQAMSPEFKLYQTQVVSNCRALSSALEEFGYHIVTGGSDNHLILVD
LRNKKTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRFGTPALTSRGFREEDFKKVA
HFIHQGILLTLEIQYDMNPKATLKDFKDKLASEGKHREKISSLKEEVEQFSSSFPIPGLP
DL
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcgccaacagaatcggaagtccatggtagttgtagttagaggacactggttt
atgagaagaacaaacttcccacctgtcctgcagttggctacaatgtatcagtgtattcag
attgagaatgtatcaaagactggatacaactggctaggggtgcaggatctgatgatggca
gactccactatgatcaatggcgcgcacactgatctatgggcatctcataaccagatggta
ctggagcctctagaaacaaacgatccagaggtgtatgagattatccgtaaggagaagcac
cgtcagcgctacggcctggagctcatagcctcggagaactttgccagctgtgcggttttg
caggctcttggctcatgtttaaacaataagtattccgagggttacccgggacagaggtac
tatggcggcacagagcacgtggatgagttggagaggctgtgtcagaagagagcgctagag
acgtacagtttggacccccagaaatggggagtaaatgtgcagccgtattcaggttcccct
gctaattttgccgtttacactgccctggtggaacctcatggaaggatcatgggactggac
ctgccagatggtggacaccttacccatggcttcatgaccgacaagaagaaaatctctgca
acgtccatcttttttgaatccatgccatacaaggtgaacccagacactggttatatagac
tacgatagactagaagaaaacgcccgcttgtttcatcccaaactaataattgccggtgtc
agctgctactcccgaaatttggactatggccggatgagggctattgctaatgaaaacaac
gctatcctgatggccgacatggcgcacattagtgggctggtggcagccggtgtggtgcct
tctccttttgaacactgtgatattgtcaccactacaactcacaagactctgcgtggctgc
cgtgccggcattatcttctatcggaagggagtccgcagcgtggatccaaagactggaaag
gacattttgtacaactatgagagtcttatcaatcaggctgtgtttcctggcctccaaggt
ggacctcataatcacgctatagcaggtattgctgtagcgctaaaacaagccatgagccca
gagttcaagttgtaccagacacaggtagtctccaattgccgggcgttgtcgagtgcattg
gaagaattcggttatcacattgttactggaggctcagataatcatctcattctggtcgat
ctgaggaacaagaagacagacggaggaagagcggagaaggtgctcgaagcctgcgccatt
gcttgtaacaagaacacctgcccaggtgacaagagcgcccttcgccccagtggccttcgg
tttggaacccctgccctgacttctcgaggtttccgggaagaggacttcaaaaaagttgcg
cactttatccaccaaggcattttgctcacactggagattcagtacgatatgaaccccaag
gcgacacttaaggattttaaggacaaactggcgtctgaaggcaaacaccgggagaagatc
tcttccctgaaggaggaggtggagcagttctccagctcattccctatacctggcctgccg
gacttgtga
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