Hyla sarda (Sardinian treefrog): 130284883
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Entry
130284883 CDS
T11475
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130284883 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsq03021
]
130284883 (CPSF4)
03019 Messenger RNA biogenesis [BR:
hsq03019
]
130284883 (CPSF4)
Transcription machinery [BR:
hsq03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
130284883 (CPSF4)
Messenger RNA biogenesis [BR:
hsq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
130284883 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_3
zf-CCCH_2
Torus
zf-CCHC
zf-CCCH_12
zf-CCCH_RBM22
zf-CCCH_4
zf-C3H1
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
130284883
NCBI-ProteinID:
XP_056391755
LinkDB
All DBs
Position
8:149290188..149317426
Genome browser
AA seq
269 aa
AA seq
DB search
MQELIACVDHIRFDLELAVEQQLGAQPLPFPGMDKSGAAVCEFFLKSACSKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCLEGPNCKFMHPRFELPMGTTEQPP
LPQQTQNQQKQNNNQSSQRSSSLIQLTSQSSPLGQQRSPQTIGVMQSQNNNIGNRGPRPL
DQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagctcatcgcttgtgtggatcacattcgcttcgacctggagctggctgtggag
cagcagctgggggcacaaccgctgccattcccgggcatggacaagtccggggcagctgtt
tgcgagttcttcctgaagtccgcttgcagcaaagggggtatgtgcccttttcgtcacatt
agtggggagaagactgtggtctgtaagcactggttacgagggctttgtaaaaaaggggac
cagtgcgagttcctgcatgaatatgacatgaccaaaatgccagagtgttacttctactcc
aagtttggtgagtgcagtaacaaggagtgcccttttttacatattgacccagaatcaaag
ataaaagactgtccctggtatgaccgaggcttctgtaaacatggtcctctatgcaggcat
cggcatacacgtagagtcatttgtgtcaactatttagtaggattctgtctggagggtcct
aactgtaaattcatgcacccccgttttgaattgcctatgggaacgactgaacaacctcct
ctacctcaacagacccagaaccagcagaagcaaaataacaaccagtcatcacagagatca
tcctcactcatccagttaacaagccagagttcacctcttggtcagcagcggtctccacag
accattggtgtaatgcagtcacagaacaataacataggaaatcgggggccaagaccactc
gatcaggttacctgttataagtgcggtgagaagggacattacgccaacagatgtacaaag
ggtcacttagcgtttctgagtggacagtga
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integrated database retrieval system
