KEGG   Hyla sarda (Sardinian treefrog): 130285528
Entry
130285528         CDS       T11475                                 
Symbol
DES
Name
(RefSeq) desmin isoform X1
  KO
K07610  desmin
Organism
hsq  Hyla sarda (Sardinian treefrog)
Pathway
hsq04519  Cadherin signaling
hsq04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:hsq00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    130285528 (DES)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    130285528 (DES)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:hsq04812]
    130285528 (DES)
Cytoskeleton proteins [BR:hsq04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     130285528 (DES)
SSDB
Motif
Pfam: Filament Filament_head ZK652 DUF7491 KIF21A_4th DUF8429 CCDC57_N Trimer_CC CLIP1 MHC_I_3 Ninein_long_CC COLEC12 DUF1664 YGR130C_N TcdA1_RBD_3 DUF2935 CEP135_TSGA10_CC WEMBL ODF2_C SPC25_N CCDC192 DUF4515 Rod_CreS Fib_alpha FKBP15 APG6_N
Other DBs
NCBI-GeneID: 130285528
NCBI-ProteinID: XP_056393006
LinkDB
Position
8:complement(18857103..18949539)
AA seq 443 aa
MSQSYSSSQRASSYRRTFGGASPSFSRTSFGSKGGSASSLSSRVYQVSRSSAVPSLSSFK
STRLAPVRASYDVLDFSLADAMNQEFLTTRTNEKVELQDLNDRFANYIEKVRYLEQQNAI
LVAEVNRIKGKEPTRISELYEEEMRELRRQVDIITNQKSRVEVERDNLADDLQRLKQRLQ
EEIQLKEDAENNLSAFRSDVDAATLARIDLERRIESLQEEIAFLKKIHEEEIRELQAQLQ
EQQVQVELDVSKPDLTAALREIRAQYENIAAKNVSEAEEWYKSKVSDLNQTAQKNNDALR
QSKQELMEYRHQIQSYTCEIDALKGTNDSLIRQMRDLEERFSGEAAGYQDSISRLEEEIR
NLKDEMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRITLPIQTYSALSFRETSPEQ
RSSEVHTKKTVMIKTIETRDGEN
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgagccagtcatactcctccagccagcgggcatcttcctaccgccgcaccttcggaggt
gcatctccatcgttctccagaacctccttcggatctaaaggaggatccgccagctccctc
tcctccagagtctaccaggtgtctcgttcctcggcggtcccaagcctctccagcttcaag
tccacaaggctcgccccggtaagagccagctacgatgtcctggacttcagcctcgcagac
gccatgaaccaggaattcctcacaacccgaaccaacgagaaggtggagctgcaggacctg
aacgataggttcgccaactacatcgagaaggtgcgttacctggagcagcagaatgccatc
ttggtggctgaagtcaaccggatcaagggcaaggagccaacaaggatcagcgagctgtac
gaggaggagatgagggagctgaggcgccaggtggacatcattaccaaccagaagtcacgg
gtggaagtggagagggacaacctggcagatgacctgcagagactgaaacagaggctccag
gaggagattcagctgaaggaagatgctgagaataacctgtccgccttcagatcagacgtc
gatgcagccaccttggccaggattgacctggagaggaggatcgaatctctgcaggaggag
atcgcattcctcaagaagatccacgaggaggaaattcgggaactgcaggcccaactgcag
gaacagcaggtacaggtagaattggacgtgtccaaaccggacttgaccgcagccctcaga
gagatccgggctcagtatgagaacatcgctgccaagaacgtttcagaagccgaggaatgg
tacaagtccaaggtgtctgacctcaaccagaccgcacagaagaacaatgacgctctgcgc
cagtccaagcaggagctgatggaataccgccaccagatccagtcctacacctgtgagatt
gacgctctcaagggaaccaacgattccctgattcgccagatgagggatctggaggaaaga
ttctccggagaggccgctgggtaccaggactccattagccggcttgaggaagaaatccgt
aacctgaaggatgagatggccagacacctccgcgagtatcaggacttgttgaacgttaag
atggcgttggatgttgagatcgccacataccgtaaactgctggaaggagaggagagcaga
atcactctccccatccagacgtactcagcactgagcttcagagagaccagtccggagcag
agatcatctgaggttcacaccaagaaaaccgtcatgatcaaaaccatcgagacccgggat
ggagagaactga

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