Hyla sarda (Sardinian treefrog): 130291107 Help Entry 130291107         CDS       T11475                                  Symbol VARS1 Name (RefSeq) valine--tRNA ligase isoform X1   KO K01873   valyl-tRNA synthetase [EC:6.1.1.9] Organism hsq  Hyla sarda (Sardinian treefrog) Pathway hsq00970   Aminoacyl-tRNA biosynthesis Brite KEGG Orthology (KO) [BR:hsq00001]  09120 Genetic Information Processing   09122 Translation    00970 Aminoacyl-tRNA biosynthesis     130291107 (VARS1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01007 Amino acid related enzymes [BR:hsq01007]     130291107 (VARS1)   09182 Protein families: genetic information processing    03016 Transfer RNA biogenesis [BR:hsq03016]     130291107 (VARS1) Enzymes [BR:hsq01000]  6. Ligases   6.1  Forming carbon-oxygen bonds    6.1.1  Ligases forming aminoacyl-tRNA and related compounds     6.1.1.9  valine---tRNA ligase      130291107 (VARS1) Amino acid related enzymes [BR:hsq01007]  Aminoacyl-tRNA synthetase   Class I (U)    130291107 (VARS1) Transfer RNA biogenesis [BR:hsq03016]  Eukaryotic type   Aminoacyl-tRNA synthetases (AARSs)    Other AARSs     130291107 (VARS1)  Prokaryotic type     130291107 (VARS1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  tRNA-synt_1 Anticodon_1 GST_C tRNA-synt_1g tRNA-synt_1_2 GST_C_2 Val_tRNA-synt_C GST_C_3 tRNA-synt_1e Arc1p_N_like Motif Other DBs NCBI-GeneID:  130291107 NCBI-ProteinID:  XP_056395498 LinkDB All DBs Position 9:complement(163058406..163128334) Genome browser AA seq 1261 aa AA seqDB search MKYLKSWERYWLPPSTMSTLYLPLSSTSDPRCVWVRISGQYSPHPRPAVQEVETGPRGLP LPCLLSPATGSVWGAWAVSYMLAPETLSGGGDPRTFSLIKQWVNYAESDLLPAAYGVDHT QIKERSLAELKRILEVLEGHLKVRTYLVGERLSLADIAVSCCLIHPYSKVLSPFFRQSIP NVTRWFLTCINQPQFKEILGEVAPLSGEARSDLSPPVVTSDPPLLNGPPKTAAQLKKESK KKEKLERFQQKQEKLKGQQTEKKPKVEKKDKKELGVITYDIPTPPGEKKDVSSSMPDSYS PQYVEAAWYPWWEKEGFFKPEYGRKSISEPNPKGMFMMCIPPPNVTGSLHLGHALTNAIQ DSLTRWHRMRGELTLWNPGCDHAGIATQVVVEKKLWREHKKNRHDLGRERFIEEVWKWKA EKGDRIYHQLRILGSSLDWDRACFTMEPKLSQAVQEAFIRLHEAGIIYRSKRLVNWSCTL NSAISDIEVDKKELTGRTVLPVPGYTEGVEFGVLVSFAYKVQDTGEEVVVATTRVETMLG DTAVAVHPQDQRYQHLRGKSVVHPFSGRLLPIVLDEFVDMSFGTGAVKITPAHDQTDYEV GMRHSLGFINIMDDNGLLVNVPSPFLGMKRFEARKAVLQALKDKGLFKEIKDNPMVVPVC SRSKDIVEPLLKPQWYVRCDEMGKRAADAVRDGTLSIKPEFHTKTWFSWMDNIRDWCISR QLWWGHRIPAYFVTIDDPSVPPGEDTDGKYWISGRSEQEVRAKTAKQFNVGPEKVSLKQD EDVLDTWFSSGLFPFSIFGWPNESEDLKVFYPGTLLETGHDILFFWVARMVMLGLTLTGE LPFKEVYLHAIVRDAHGRKMSKSLGNVIDPLDVIKGITIQGLHAQLLDSNLDPAEMERAK EGQKADYPMGIPECGTDALRFALCAYTSQGRDINLDVNRILGYRHFCNKLWNATKFAMRG LGDGYTPSPSSLPTGQESLADLWILSRLSLAVDLCNTGFQNYDFPGITTAIYNFWLYDLC DVYLECLKPLFASTDEVAIAVARNTLYTCLDAGLRLLSPIMPFLTEELYQRLPRRSSETF PSVSVTPYPEATEYKWRDEEIERKMELALLIVKSIRSLRADYNLTKTKADCYVKCQDEDT KSVVVAYTSYIIVLSSSGSLVILEPSDPAPEGSAVNTASDKATVFMNLKGLIDVEKELAK LQVKKTELSRQLSKLRERMGGADYSAKVPPAVQQQDSEKMKQFETEYQKVEEAVSSFQKI V NT seq 3786 nt NT seq  +upstreamnt  +downstreamnt atgaaatacctcaaatcctgggaaaggtattggcttcccccttccaccatgtcgactctc taccttcctctgtcttctacctcagacccgcgatgcgtgtgggtgcgcatctccggacag tactctccgcaccctcggccggcggtgcaggaggtggagacagggcctcgcggtcttccc ctcccatgcctgctgtctcccgccactggctcagtatggggggcctgggccgtgtcttac atgctggctcctgagaccctctcagggggaggggaccccagaacgttctctctcattaag cagtgggtgaactacgccgaatcggacctgttaccggcggcctatggagtggaccatacg cagataaaagagcgctcccttgcggagctcaagaggatcctggaagtgttagagggccac cttaaagtacggacttacttagtaggggagcgcctgagcctggccgacatcgctgtgtcc tgttgtctcatccatccgtacagcaaggtcctctctcctttcttcagacagtctattcct aatgtcacccgctggttcctgacctgtataaaccagccgcaatttaaagagattttggga gaggtggccccactaagcggagaagccaggagtgacctgagccctccagttgttacatca gaccctcctctacttaatggtcctcccaagaccgctgcccagctgaagaaggagtccaag aaaaaagagaagctggagcgcttccagcagaagcaggaaaagctgaagggacagcagacc gagaagaaaccgaaggtggagaagaaagacaagaaggagctcggtgtgatcacctatgat atcccgacccctccaggagagaagaaggatgtctctagttctatgccggattcctatagt cctcagtatgtggaggctgcctggtacccgtggtgggagaaggaaggatttttcaaacca gagtatgggagaaaaagtatctcagaacccaacccgaagggcatgtttatgatgtgtatc cctcccccaaatgtcaccggatctctacatcttggccatgccctcaccaacgccatccag gacagcctgacccgctggcatcggatgcgcggcgagctgaccttatggaatccgggttgt gaccatgcggggatcgctactcaggtggtggtggagaagaagctctggagggaacacaag aagaaccgacatgacctgggccgagagcgcttcatagaggaggtctggaagtggaaggca gaaaaaggagaccggatctatcaccagttgaggattcttggaagttcactggactgggat cgggcatgtttcacaatggaaccaaaactatcgcaagccgttcaggaggcgtttatccgt ttgcacgaagccggaattatctaccgcagcaagcgtcttgtcaactggtcgtgcaccctc aactctgctatatccgatatagaggtagacaagaaggagctgacgggtcgcacagtactg ccagtgcctggatacactgagggggtggaatttggggtgttggtttcctttgcatataag gttcaagatacaggtgaggaggttgtggtggccaccactcgtgtggagaccatgttgggg gatacggccgtggcggtacatccacaggatcagcggtaccagcacttgagaggaaagtct gtggttcacccgttctccggcagactccttcccatagtcttggatgagtttgtggatatg agcttcggcactggagcggtgaagatcaccccggctcatgaccagaccgattacgaggtc gggatgagacactctctgggctttattaacatcatggacgacaacgggctgctggtgaac gttccttcaccgttcttgggaatgaaacgttttgaagccaggaaagccgtcctgcaagct ttgaaagataagggattattcaaggaaataaaggacaatcctatggtggtcccagtctgc agccgctccaaggatatcgtggagccgctcctgaagcctcagtggtacgtgcgctgcgat gagatgggcaagagagcggccgatgccgtccgcgacgggaccctgtcaatcaaacccgag ttccacaccaaaacctggttcagctggatggataacatcagggattggtgcatttctcgg caactctggtggggtcatcggatccctgcttactttgttacaattgatgacccgtcagtg ccccccggggaggatactgatggcaagtactggatcagtggccgatcagagcaggaggtg agagccaagacggctaaacagttcaatgttggccctgagaaggtgtcacttaagcaggat gaagacgtattagacacctggttttcttctggacttttcccattctccatctttggctgg cccaacgagagtgaggacttaaaggttttctatcccggcactctcctggagactggacac gacatcttgttcttctgggtggcccgaatggtgatgctaggtctaacccttactggggag ctgcccttcaaagaggtatacctccatgctatagtacgtgatgctcatgggcgcaagatg agtaaatcattgggcaatgtcattgatcctctggatgtgatcaagggaattaccatacag ggtcttcatgctcagcttctggacagtaatctggatcctgccgagatggaaagagccaag gaaggacagaaagctgactaccccatggggatccctgagtgcggaacagacgctcttaga tttgctttgtgtgcatataccagtcagggacgagatattaacttagatgtgaacaggatc cttggttaccgccacttctgcaacaagctgtggaacgcaaccaaattcgctatgcgtggc ctgggagatggctacaccccttctccatcttctctgcccaccggacaggagagtctggcg gacctctggattctgagtcgcctcagtttagcggtggatctttgcaacactggctttcag aattatgacttcccggggatcaccactgccatatacaacttctggttgtatgatctgtgt gacgtctacctggagtgtttgaagcctttgtttgccagcacagatgaagtcgccatagca gtagcaagaaacacactgtacacgtgtctggacgccggcctccgactcctctcacccatc atgcctttcctcacggaagaactttatcagagactcccccgacgttcttccgagacgttc ccaagtgtgtctgtcactccttatcctgaagctactgagtacaaatggcgggatgaagaa atagagagaaaaatggagctcgctctgcttattgtgaaatctatccggtctttgcgggcc gactacaatctcaccaagactaaggctgactgttacgtgaaatgtcaggacgaagatacc aaatccgtggtggtcgcttacacctcctatatcatcgtcctctcttcttcgggatccctg gtaatcctcgagccttcggatccagccccggagggaagtgctgtcaatacggcttccgat aaggctactgtattcatgaacctcaaggggctcattgatgtggagaaggagctggccaag ttgcaggtgaagaagactgagctgagccgacagctgtcaaaattacgggagcggatggga ggagcagattacagcgccaaggtccccccagcagtgcaacagcaagactctgaaaagatg aagcagtttgaaacagaataccagaaggtggaggaggccgtgagcagtttccagaagatt gtttag

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