Hyla sarda (Sardinian treefrog): 130291144
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Entry
130291144 CDS
T11475
Symbol
GTF2H2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq03022
Basal transcription factors
hsq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130291144 (GTF2H2)
09124 Replication and repair
03420 Nucleotide excision repair
130291144 (GTF2H2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsq03021
]
130291144 (GTF2H2)
03400 DNA repair and recombination proteins [BR:
hsq03400
]
130291144 (GTF2H2)
Transcription machinery [BR:
hsq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
130291144 (GTF2H2)
DNA repair and recombination proteins [BR:
hsq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
130291144 (GTF2H2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
Zn_ribbon_GTF2H2
VWA
C1_2
Motif
Other DBs
NCBI-GeneID:
130291144
NCBI-ProteinID:
XP_056395576
LinkDB
All DBs
Position
1:complement(527962696..528016934)
Genome browser
AA seq
394 aa
AA seq
DB search
MDEEPEKTKRWEGGYERTWEVLKEDESGSLKATIDDILFKDKRKRVFEHHGQVRLGMMRH
MFVIIDGSRTMDDQDLKPNRLISTLKLLEYFVDEYFDQNPISQVGLLVTRNKRAEKLTEL
AGNPRQHIAALKKAVDMTCSGEPSLYNSLNLALQTLKHMPGHTSREILVIFSSLTTCDPS
NIYDIIKSLKASKIRVSVIGLSAEVRVCTVLTKETGGAYNVILDESHYKELLMHHVSPPA
SNGSECSLIRMGFPQHTVCSLSDQDAKPSFSMAHLDSNSEPGLTLGGYFCPQCKAKYSEL
PVECKVCRLTLVSAPHLARSYHHLFPLDAFKEVTLAEYEGERYCRGCDGELNDQQVYICT
VCDCVFCVECDLFIHDSLHCCPGCIHTQPNSMVS
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaccagaaaaaactaagagatgggaaggtggctatgagagaacttgggag
gttctcaaagaagatgaatctggatcactgaaggctacaattgatgatattctgttcaag
gataaaaggaaaagagtgtttgaacatcatggacaggtccgcctgggaatgatgcgtcac
atgtttgtgataattgacggatccagaacaatggatgatcaagacctaaaacccaacaga
cttattagcactttaaaattgctggaatattttgtggatgaatactttgatcaaaaccct
ataagtcaggttggacttcttgtcactagaaataaaagagctgaaaagctgaccgagctt
gctggtaaccccaggcagcatatagcagcactgaagaaagccgtagacatgacctgcagt
ggcgagccttccctgtacaattctctcaaccttgcgctgcagacactaaaacacatgcct
ggacacacaagtcgtgaaatcttggtgatttttagcagcctgacaacatgtgatccatcc
aatatatatgacattattaagtccctaaaagccagcaaaatcagggtgtctgttatcggg
ctttctgcagaggtgcgagtctgcactgtgcttactaaggagactggaggagcttataat
gtcattttggatgagagtcactataaagagcttctgatgcaccatgtcagtcctccagca
agtaacggctctgagtgctcccttatacgcatgggcttccctcagcatacagtgtgttct
ctctctgatcaagatgcaaagccttcatttagcatggcgcacctggatagtaacagtgaa
ccaggcctcacccttggtggctatttctgccctcagtgcaaagccaaatactctgaactt
cctgtggaatgcaaagtttgccgccttacattagtgtctgctcctcacctggctcgttca
tatcatcacttgtttcctttggatgcttttaaagaagttaccctagcagaatatgaaggg
gagaggtattgtcgaggctgtgatggagaactgaatgatcagcaagtttacatctgtaca
gtatgtgactgcgtcttctgtgtggagtgcgacttgttcattcatgactccttacattgt
tgtcctgggtgcattcatacacagccaaactcaatggtatcatga
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