Hyla sarda (Sardinian treefrog): 130293650
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Entry
130293650 CDS
T11475
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130293650 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsq03019
]
130293650 (CNOT3)
Messenger RNA biogenesis [BR:
hsq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130293650 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
130293650 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Patatin
Cluap1
Motif
Other DBs
NCBI-GeneID:
130293650
NCBI-ProteinID:
XP_056398561
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All DBs
Position
10:complement(32954767..33040883)
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AA seq
724 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDSLNMGVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKKHIEKHRYH
IRMLETILRMLDNDSINVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALA
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKIRGRSTDSEVSQ
SPAKNGSKSIHNNHHPQSPAVTPSYQIGSSSSTSSLGNGPGTNSNGAVSNSSSTSSNSST
NSKNNPSSGHTSGTPTPYAQAVAPPPSNTNTSQPRPPSAQQNTSKQNGATSYSSVVAENS
ADTALSNSSQSQSNQSVIHNPPTSTAKETNSVSQPAISSSTSTGPSLLLPLSVNPPSSPT
PSFSDPKPSQPLLNGPPQFNSTPEIKAPEPLSTLKSMAERAAIGTNLEDPVPAIHLADRE
ILITTTTTQPPATQPSTQLSEVNIPLSLGVCPLGPVPLTTDQLYQQAMEDAAWHHMPHPS
DSERIRQYLPRNPCPTPQYHHQMPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAK
ALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLED
RDLQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcggataagagaaaactacagggtgaaattgatcggtgtttgaaaaaggtgtcggaa
ggggtggagcagtttgaagacatttggcaaaagctacacaatgcagctaatgccaatcag
aaagaaaaatatgaagcagacttgaagaaggagattaagaagcttcagagattgcgggac
caaataaagacatgggtggcatccaatgagatcaaagacaagaggcagcttatagaaaat
cgaaaactaatagaaacgcaaatggagaggttcaaagtggtagaacgtgaaacaaaaaca
aaagcatactccaaggaaggtcttggtcttgctcagaaggttgacccagctcagaaggag
aaggaagaggttggacagtggttaacgaacacaattgactccttgaacatgggcgtggat
cagtttgaaagtgaggtggagtcgttgtcggtacaaacgcggaaaaagaaaggagacaag
gatcagaagcaggacaggatcgagggactgaagaagcacatagaaaaacataggtaccac
atccgaatgctggaaaccattctgcgaatgttggataatgactcaatcaatgttgatgca
atcaggaagattaaggatgatgtagaatactatgtggactcttcgcaagatcctgacttt
gaagagaatgagttcctctatgatgaccttgatttagaagacattccacaggcgctggca
gctacttccccaccaagccacagtcacatggaggatgagatcttcaaccagtctagcagc
actcccacctccaccacatcaagttctcctattccaccaagtcctgccaattgcaccaca
gaaaactctgaagatgacaagaaaatccgagggagatcgacagacagtgaagtcagtcag
tcaccagcaaagaacggttctaaaagtatccataacaaccatcatccgcagtcccctgca
gtgacaccaagttaccaaataggaagcagttccagcacgtcatctctcggaaacgggccg
ggtacaaacagcaatggagcagtatcaaacagcagcagtacgagcagcaacagcagcacg
aacagcaaaaacaacccgtccagtggacacacgtctggtacgcctacaccttatgcacag
gctgtggctcctcctccatctaatacaaatacatcccagccgaggccccccagtgcccag
caaaatacaagcaagcaaaatggagcaacaagttatagctctgtagtagcagaaaattcc
gcagatactgcacttagtaacagcagtcaatcacaatcaaaccagtctgtgattcacaac
ccaccaaccagcactgcgaaagagacaaacagtgtatcacagccagccatcagcagtagt
accagcactgggcccagcttactattacctttaagtgtaaaccctcctagttcgccaaca
cccagcttcagcgaccctaaacccagccagccgctactaaacgggccacctcagttcaac
tccacaccagagatcaaggcacctgagcctttaagtacactgaaatccatggcagaacgt
gcagctattggaacgaacttagaagatccagtccctgctatccatttggctgaccgagaa
atccttatcactacaaccacaacgcaacctccggccactcagccatcaactcagctttca
gaagtcaacatccctctttcattgggtgtgtgtcctctgggaccagttccccttacaaca
gatcagctttaccagcaagcaatggaagatgcagcatggcatcatatgcctcacccctca
gattcagagagaatacggcaataccttccgaggaatccttgtccgacaccccagtatcac
caccagatgcccccgcctcactcggacacagtagaattctaccaacgactttccacagag
acacttttctttatcttttactatctggagggcactaaagcacagtatttagctgctaaa
gctttgaaaaagcagtcatggaggtttcacaccaaatacatgatgtggttccagagacat
gaggagcccaagacaataacagatgagtttgagcaggggacatacatttactttgactat
gaaaaatggggccagaggaagaaagaagggttcacgtttgaataccgctacctagaggat
cgtgacttacagtga
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