Hyla sarda (Sardinian treefrog): 130294123
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Entry
130294123 CDS
T11475
Symbol
LRRC4B
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq04514
Cell adhesion molecule (CAM) interaction
hsq04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130294123 (LRRC4B)
04517 IgSF CAM signaling
130294123 (LRRC4B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsq04515
]
130294123 (LRRC4B)
Cell adhesion molecules [BR:
hsq04515
]
Immunoglobulin superfamily
NGL family
130294123 (LRRC4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
Ig_2
VEGFR1-3_N_Ig-like
LRRNT
LRR_EndoS
DUF7617
LRR_NXF1-5
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
130294123
NCBI-ProteinID:
XP_056399570
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All DBs
Position
10:6448592..6572836
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AA seq
642 aa
AA seq
DB search
MVTNHCTHRMLGLKIFRMILKQVLLISWVSSLALGGTSPTSCPAACSCSNQASRVACTRK
ELIEVPESISVNTRYLNLQENTIQVIKTDTFKHLRHLEILQLSKNLIRKIEVGAFNGLPN
LSTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKKL
EYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLEMIRPGSFQGLSSL
RKLWLMHAHVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPWHC
NCDILWLSWWLKETVPNNTTCCARCHSPPNLKTRYIGELDQSHFTCYAPVIVEPPTDLNV
TEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYT
CMVTNAAGNTTASATLNVSAVVDPATTDYTYFTTVTVETMDSSPEEVKPAEKEPGPTTTT
VRWGITYSTTSLTPRSTRSTEKTFTIPITDVTENIMKDLDDVMKTTKIIIGCFVAITFMA
AVMLIAFYKLRKQHQLHKHHGPTRTIEIINVEDELPATAPGDNHMALPAIEHDHLNHYTA
FKSHYNNNTGTLNCAKNPMLNSIHEPLLFKSSSKENVQETQI
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggtcaccaaccattgcacccacaggatgcttggtttgaagatttttagaatgattttg
aagcaagttttacttatctcatgggtctcatccctggccctgggaggaacatctccaacg
tcttgtcccgccgcctgttcttgcagcaatcaagccagtcgagtggcttgtacacggaaa
gaactgatagaagtgcccgaaagcatctcagtcaatacgcgatacctgaaccttcaggag
aacactattcaggtgatcaaaacagacacttttaagcacctccgacatttggaaatatta
cagctcagcaaaaaccttattcgtaagattgaggtgggagcttttaatggactcccaaac
ttgagcacattggagctttttgataatcgcttgaccactgttcctactcaagccttcgaa
tatctgtccaagctaagggagctgtggctaagaaacaatcccatcgaaagtatcccgtca
tatgcgttcaacagagtcccttctttgagacgactcgatttgggagaactgaagaagttg
gagtatatttccgaagctgcttttgagggtcttgtgaacttgagatacctaaatctgggc
atgtgcaatttaaaagatatacccaacttaacggcattggtcagactggaagaactcgag
ttgtctggcaatcgtctagaaatgattcgtcccggctccttccagggtctgagtagcctg
agaaagttgtggctgatgcatgctcatgtggccaccatagagcgcaatgccttcgatgac
ttgaaatcattggaggaacttaatctttctcacaacaatttaatgtctcttccccatgat
ctttttactcctcttcaccgcctggagcgagtacaccttaaccataatccttggcattgc
aactgtgacattttgtggttaagctggtggttaaaggagactgtgccaaacaatacgacc
tgttgtgcgcgttgtcattccccaccaaacctaaaaactagatacataggggaactagat
cagagtcacttcacctgctatgccccggtaatagtggagcctcccactgaccttaacgtc
accgagggcatggccgctgagcttaaatgcagaactggcacgtcaatgacatcggtcaac
tggttaacaccaaatgggacattgatgactcacggttcttatagagtacgtatctctgtc
ttacacgacggcacgctgaattttacaaatgttacggtacaggacacaggacaatacact
tgcatggtcactaatgcggcaggaaatacgacagcatctgctactcttaatgtctctgct
gtcgttgacccagcaaccactgactatacctactttacaacagttactgtagaaactatg
gattcatccccggaggaagtgaagcctgctgagaaagagcctggtccaacaacaacaaca
gttcgatgggggataacatactctaccacgtccctcacgcctcgaagcacccgctccacc
gagaagacatttactatccctataaccgacgtgacggagaacatcatgaaagacctagac
gacgtcatgaagaccaccaagatcatcatagggtgcttcgtggccatcacctttatggca
gccgtcatgttaatcgccttttacaaactccggaaacagcaccagctacacaaacatcat
gggccaacacgaactatagaaattattaatgtggaagatgaattaccagccactgccccc
ggagacaaccacatggcactcccggctattgagcatgatcaccttaaccattatacggca
tttaagtcccattataacaacaatacaggaacacttaactgtgccaaaaaccccatgctg
aactccattcacgaaccccttctgttcaaaagcagctcgaaggaaaatgtgcaagaaaca
caaatttag
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