Hyla sarda (Sardinian treefrog): 130294337
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Entry
130294337 CDS
T11475
Symbol
MYO5B
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
130294337 (MYO5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsq03019
]
130294337 (MYO5B)
04131 Membrane trafficking [BR:
hsq04131
]
130294337 (MYO5B)
03029 Mitochondrial biogenesis [BR:
hsq03029
]
130294337 (MYO5B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsq04812
]
130294337 (MYO5B)
Messenger RNA biogenesis [BR:
hsq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
130294337 (MYO5B)
mRNA cycle factors
P-body specific factors
130294337 (MYO5B)
Membrane trafficking [BR:
hsq04131
]
Others
Actin-binding proteins
Myosins
130294337 (MYO5B)
Mitochondrial biogenesis [BR:
hsq03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
130294337 (MYO5B)
Cytoskeleton proteins [BR:
hsq04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
130294337 (MYO5B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
Myosin_N
AAA_22
YkzS
nSTAND3
Ac76
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
130294337
NCBI-ProteinID:
XP_056399951
LinkDB
All DBs
Position
1:complement(573466462..573771611)
Genome browser
AA seq
1839 aa
AA seq
DB search
MSVYELYTRYTRVWIPDQEEVWRSAEIIKDYKEGDKVLQLKLEDESVLAYPVALDSLPHL
RNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIYGED
VIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYFAT
VGGSASETNVEDKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDKRYHIIGANMRTY
LLEKSRVVFQAEEERNYHIFYQLCASSGLPEFADFSLSQAEDFFYTSQGGDTVIDGVDDA
DDFEKTRQAFTLLGVKESHQMSIFRIIASILHLGNIEVISERDGDSSSLSKGDPHLNHFC
TLLGVEHDQMEHWLCHRKLVTTSETYVKTMSVQQAINARNALAKHIYAQLFNWIVQHVNK
ALYTTSKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLEQEEYMKEQ
IPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYDRHGSSQHFKKPR
MSNVSFIVVHFADKVEYQCDGFLEKNRDTVYEEQINILKASKYQLVADLFHDDKDPVPPT
SGGKSKVNVRPAKPAMKSANKEHKKTVGHQFRNSLQLLMETLNATTPHYVRCIKPNDDKM
PFSFDPKRAVQQLRACGVLETIRISAAGYPSRWTYHDFFNRYRILMDKKHLSQPDKKITC
RNLLENLIKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFRAATIMIQKTVRGWLQRLKYK
RMRAAAITIQRWTRGYLARRWADHLRKTKAAICFQKQYRMIRVYRVYQMVRRAAITIQAY
TRGMFDRRVYRELLLQHKAKIIQKHLKGWVARKNFIKFRSAAIVIQCYFRRMMARRELKQ
LKIEARTAEHFKKLSVGMENKVVQLQRKIDEQNKEHKDLKEQLAAVTVARTTEVEKLQKE
LERQRQNQQDENQLSSLQEEIESLREELAKSRDERKITEDLYANEKKQLQQRIAELEVEN
AHLKEDKEELNKRILLRSEDESTQSALKENQEHQKDLEEERARYQNLVKEYTRLEQRYDN
LQEEVTLIKQSPGHRRNPSNQSSLESDSNYPSISTSEIGDTEDTIMEVEEVGLEKAAMDM
TLFLKLQKRVRELEGERKKLQNQLDKKEQQENKKSQVIETANDTDRDTDIAYNNLKRQEL
ESENKKLKNELNELRKAIADSAGDADSNEESGGYTLLLNQLKSAIEELEVRKEEVLILRT
QIVNSAQQKDADKNKESEANWTNSNKEMDQDDAIEAYHGVCETNRKTEDWGYLNEDGELG
LAYQGLKQVARLLEAQLQAQSQQHDDEVEALTDQIEVLKEEMEKQQQVLLQAMQLSPEAQ
VELGLQHEITRLTNENLDLKELLEKSEKNEKKLKKQLKLYLKKVQESEGAVDIIQPERRQ
SQLNRQVTVQRIEKDFQGMLEYYREDEPLLVRNLIIDLKPQSISTSVPCLPAYILFMCIR
HADYVNDDQKVHSLLTSTINGIKKVLKKHNDDFQMTSFWLSNSSRILHCLKQYSGDEGFL
TSNSVKQNEHCLRNFDLTEYRQVLSDLSIQIYQQLIKIAESLLQPMIVSAMLENESIQGL
SGVKPTGYRKRSSSMVDGGDNSYSLEAVIRQLNLFNSIMCEHGLDPEIIQQVFKQLFYMI
NAVALNNLLLRKDVCSWSTGMQLRYNISQLEEWLRGKNLHNSGAAQTMEPLIQAAQLLQL
KKKTQEDAEAICSLCNVLTTQQIVKILNLYTPVNEFEERVTVAFIRSIQAQLQDRKDPPQ
LLLDSKYMFPVLFPFNPSSITLDSVHIPDSLRLDFLNKV
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgtacgagctctacacccggtacacccgggtgtggatccctgatcaagaggaa
gtttggcgatcagctgaaattatcaaggattataaagaaggagataaagttctgcagctg
aagcttgaagatgaatctgttctggcgtaccccgtggctctagactcattacctcaccta
cgtaatccggatattctggtgggagaaaatgacctgacggcgctaagttacctccatgaa
cccgcagttctccataacctcaaagtccgcttcttagaatccaaccacatctatacatat
tgcggaattgtgctagttgccattaatccttacgagcagttgccaatctacggcgaagat
gtcatctatgcctacagcgggcaaaacatgggcgatatggaccctcatatatttgctgtg
gcagaagaagcatataagcagatggccagagatgagaagaaccagtcaatcattgtcagt
ggagagtctggggctgggaaaactgtgtctgccaagtatgccatgaggtactttgccacc
gttgggggatctgccagtgaaacgaacgtggaggataaagtcctggcatcaagtcccatt
atggaggccattggaaatgccaaaaccacccggaatgacaacagcagcaggttcgggaaa
tacatccagataggatttgacaagagatatcacattattggtgctaatatgagaacctac
ctgctcgagaagtcacgtgttgtgttccaggcggaggaagagaggaactaccacatcttt
taccagctctgcgcttcctctggtttgcccgaattcgccgacttttcactatcacaagcg
gaggattttttttacacctcgcagggaggtgacacggtcattgatggggtggatgacgcg
gacgactttgagaagaccagacaggcgtttacacttctgggagtcaaggagtcgcaccag
atgagcatatttaggataatagcttccattctgcacttggggaacatagaggtcatctca
gagcgggacggggattccagcagcttgtcgaagggagacccacatcttaaccacttctgc
acgttgctcggggtggagcacgaccagatggagcattggctgtgccaccggaaactggtc
accacgtcggaaacttacgtgaaaaccatgtctgtgcagcaagccatcaacgccaggaat
gcgctggccaagcacatctacgctcagctattcaactggatagtgcaacatgtgaacaag
gctctatacaccaccagcaagcaacactcatttatcggtgtgctggatatatacgggttt
gaaacattcgagataaacagctttgaacaattctgcatcaactacgccaatgagaaacta
cagcagcagttcaactcgcatgtgttcaaactggagcaagaagaatacatgaaagaacag
atcccatggaccctcattgatttctatgataatcaaccctgcatcgacctgattgaggcc
aaacttggaatcctggatctcctggatgaggagtgtaaggtccccaaaggcacggaccag
aactgggctcagaagctgtatgaccggcatggcagcagtcagcactttaagaagcctcgg
atgtctaatgtctcttttattgtcgttcactttgctgacaaggtggaataccagtgtgat
ggattcttggagaaaaatcgggatacagtgtatgaagagcagattaatatcctgaaggcc
agtaagtatcagctggtcgcagatcttttccatgatgacaaagatcccgtccctccaact
tcaggtggaaaatctaaagttaacgtcagaccagcaaaaccagccatgaaaagtgccaac
aaagagcacaagaaaactgtcggacatcagttccgcaactctctgcagttgctaatggag
actttaaatgcgacaactcctcattacgtgcgctgcattaaacccaatgacgataagatg
ccattcagctttgatccaaagagagccgtgcagcagctgagggcttgtggtgtcctggag
acaatccgaatcagtgccgcaggctatccatccaggtggacctaccatgacttcttcaac
agatatcgcatattgatggataagaagcatctttctcaacctgataagaaaatcacctgc
agaaacctgctggagaatcttataaaggatccagacaagttccagtttgggcggaccaag
atctttttccgtgctgggcaagtggcttatctagagaaacttcgtgctgataagttccga
gctgccaccatcatgattcagaagacagtacgtggctggttacagaggctgaagtataag
aggatgagagctgccgccatcaccatccagaggtggacacgggggtaccttgcccgcagg
tgggccgaccatctccgcaaaactaaagcagccatctgcttccagaagcagtaccgaatg
atccgcgtgtatcgtgtctaccagatggtccgaagagcggccatcactatccaggcctac
acccggggcatgttcgataggagagtttatcgagagctcttgcttcagcacaaagctaaa
atcatccaaaagcatctgaaaggatgggtcgcccgcaagaatttcatcaagttccgcagt
gccgccattgttatccagtgctacttccgcaggatgatggcgcgacgcgagctcaaacag
ctaaagatcgaggctaggacggcagagcacttcaagaagctgagcgtggggatggagaac
aaggtggtgcagctgcagaggaagattgatgaacagaacaaagagcacaaagacctgaag
gaacaacttgctgccgtaacggtggcgcgcacaacagaagtggagaagctgcagaaggag
ctggagcggcagcgacagaaccagcaagacgagaaccagctgagcagcctacaggaggaa
atcgaatcgctcagagaagaactcgccaagagcagggacgagaggaagatcaccgaggac
ttgtatgccaacgagaagaagcagctgcaacagaggatcgctgagctagaagtggaaaac
gctcatttaaaagaagataaagaagaactcaacaaaagaatcctcctccgctctgaagat
gagtctacccagagtgcactcaaggaaaaccaggaacaccagaaggacctggaagaagag
agagctcgctaccagaacctagtgaaggaatacacccggctggagcagagatatgacaac
ctgcaggaggaggtcactctcatcaagcaatcaccaggacatcgcaggaacccatcaaac
caaagcagcctggaatctgattccaactacccctcaatatccacctctgaaattggggac
acagaagataccattatggaggtggaggaagtggggctggaaaaggctgcgatggacatg
actctgttcctgaagctgcagaagagggtgagagagctcgagggggagaggaagaagctg
cagaaccaactggacaagaaagagcaacaagaaaataaaaagtctcaggtaattgagaca
gcgaacgacacagaccgtgacacagacatcgcctacaacaacctgaagagacaagaactg
gagtctgaaaacaagaagctgaagaacgagttgaatgaacttagaaaagccattgctgat
tcagcaggagatgcagactccaacgaagagtccggtggttacaccctcctcctgaaccag
ctgaagtctgccatcgaggagctggaggtgcggaaggaagaggttcttatcctgaggaca
cagatcgtgaactctgcccagcagaaagatgccgacaagaacaaggaatcagaagcaaac
tggactaacagcaacaaagagatggaccaagatgatgccattgaggcataccacggcgtc
tgcgagacaaatagaaagactgaggactgggggtatctaaatgaagacggtgagctgggc
ctggcttatcaaggcttaaagcaagttgccagactcctggaggcccagctacaggcgcag
agccagcagcacgacgatgaggtggaggcgctgaccgatcagatcgaagtgctgaaagaa
gaaatggagaaacagcagcaagttctgctccaggccatgcagttgtccccggaggcgcag
gtggagttgggactacagcatgagatcacacggctcacaaatgagaatctggacctgaag
gaattgctggagaagtcggaaaagaacgagaagaaactgaaaaaacaactaaagctttat
ctgaagaaggttcaagaatctgaaggagcggtagacatcattcagccggagaggaggcag
tctcaactaaacagacaggtgacagtgcaacgcatcgaaaaggatttccagggaatgttg
gagtattacagagaggatgagcctcttctcgtcaggaacctcattatagatctgaagcca
caatcgatatctaccagtgtgccgtgcctgcctgcatacatcctctttatgtgtatcaga
cacgcagactacgtcaacgatgaccagaaggttcactccctcctcacatccaccatcaat
ggcataaagaaggtgctgaagaaacacaatgatgatttccaaatgacgtctttctggctg
tcaaactccagccggattctccattgtctgaagcaatacagcggggatgagggttttctg
acgagcaactctgtcaagcagaacgagcattgcctccgcaacttcgacctcacagagtat
cgccaggtcctcagtgatttatccatccagatataccagcagctcataaagattgctgaa
agcctattgcagccaatgatagtttcggccatgctggaaaatgaaagcatccagggctta
tcaggggtgaagccgactggttatcggaagaggtcgtccagcatggtggacggaggcgac
aactcgtacagcctggaagccgtgattcgtcagctgaacttattcaacagcatcatgtgt
gagcacggcctggacccggagatcatacagcaggtcttcaaacagctcttctacatgatt
aatgcagtggccctgaacaacctcctgctgaggaaggacgtctgctcctggagcactggc
atgcagctcaggtataacatcagtcagctggaggagtggcttcgggggaagaacctgcac
aacagcggagccgcacagaccatggagccgctgatccaggcagcacagcttctgcagctg
aaaaagaaaacccaggaggatgcggaggccatatgttccctgtgcaatgttcttaccaca
cagcagatagtaaagatcctgaacttgtacacgccagtcaatgagtttgaggaacgtgtg
acggtcgcttttatcaggagtattcaggctcagttacaggaccgaaaagaccctccccag
ttgctgctagactccaagtacatgttcccagttttattcccctttaacccgtcatcaatc
accttggactctgttcatatacccgactccctcagactcgacttcctcaacaaagtttga
DBGET
integrated database retrieval system
