KEGG   Hyla sarda (Sardinian treefrog): 130294642
Entry
130294642         CDS       T11475                                 
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
  KO
K20179  vacuolar protein sorting-associated protein 11
Organism
hsq  Hyla sarda (Sardinian treefrog)
Pathway
hsq04140  Autophagy - animal
hsq04142  Lysosome biogenesis
hsq04148  Efferocytosis
hsq05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:hsq00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    130294642 (VPS11)
   04140 Autophagy - animal
    130294642 (VPS11)
   04148 Efferocytosis
    130294642 (VPS11)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    130294642 (VPS11)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsq04131]
    130294642 (VPS11)
Membrane trafficking [BR:hsq04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    130294642 (VPS11)
   Hops complex
    130294642 (VPS11)
SSDB
Motif
Pfam: PEP5_VPS11_N TPR_PEP5_VPS11 VPS11_N VPS11_C VPS18_solenoid_2nd zf-C3HC4_2 Clathrin zf-RING_2 zf-C3HC4 TPR_Vps41 Beta-prop_WDR36-Utp21_1st zf-rbx1 Beta-prop_WDR3_1st zf-C3H2C3 Beta-prop_IFT122_1st zf-RING_UBOX zf-RING_5 Beta-prop_EML_2 TPR_11 DLP_helical zf-ANAPC11 Beta-prop_WDR5 Beta-prop_NOL10_N zf-RING_11 zf-RING-like TMF_DNA_bd zf-C3HC4_3 WDR55 TSGP1 zf_RING_Vps8_fungal
Other DBs
NCBI-GeneID: 130294642
NCBI-ProteinID: XP_056400787
LinkDB
Position
10:70897241..70954120
AA seq 914 aa
MAAYLQWRRFVFFEKEPVRLPGEGGKPLTLPPGLTVCDSGRGSLLFGDMTGQIWFLPRSL
QLTSFQAYKLRVTHLHQLKQHNILVSVGEDEEGVNPVVKVWNLEKRDGGNPLCTRIFPAI
PGNKPTVVSCITVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTQILQEGSYPITGMAFR
QTGKTTHLFVVTTESVRVYELSQKDYPYTELDSHGCGLRCSTLSDPSQDMQFVVAGNECI
YLYQSDERGPCFAFEGQKLIVHWYRGYLVIVSRERSDFAGRGGDSHAPDRQTLTIYDLGN
KLIAYSCVLSDVVDVLAEWGSLYVLTRDGLLHALHEKDTQTKLEMLFKKNLYVMAISLAK
GQHLDSDGLSEIFRQYGDHLYSKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHNLTA
YLQALHLQSLANADHTTLLLNCYTKLKDSARLEEFIKASEGEVHFDVEIAIKVLRQAGYH
SHALYLAEKHAHHEWYLKIQLEDIKNFQEALRYIGRLPFSQAESNMKCYGKILMYHVPNE
TTQLLNDLCTDFPQPGGGNRANPEEFIPIFANNPCELKTFLEHMTKLQSDSPQGVYDTLL
ELRLQNWAHESNPQAKQQLQNDAMTLLKSGRFKNVFDKALVLCQMHNFQKGVLYLYEQGK
LFQQIMHYHMQNDQYQEVIEACKQYGEQENCLWEQALSYFARKEEDCKEHIATVLRHIES
KNLMPPLLVVQTLAHNSTATLSVIRDYLINKMQKLSQQAEEDERTVNQYREETARIRQEI
HELRNSPKIFQKTKCSICSSALELPSVHFLCGHSFHQHCFESYAESDSDCPTCLPENRQV
LDMIRAQEEKKDLYDHFQHQLKCSNDGFSVVAEYFGRGVFNKLTLITDAPTGRMTGVKDA
GLQRDLLINTRRNF
NT seq 2745 nt   +upstreamnt  +downstreamnt
atggcggcgtatctgcagtggaggcgatttgttttctttgagaaagagccggtccggctt
cctggggagggcgggaaacctctcacactgccacccgggctgactgtgtgcgattccggc
cgcggtagtctgctgtttggggatatgacaggacagatctggttcttgcctcggtcccta
cagctcacctcttttcaggcttataaactcagagtcacccaccttcatcagctaaagcaa
cacaacatccttgtctctgtaggcgaggatgaggagggggttaatccagtggtcaaagtt
tggaacctggaaaagcgtgatggaggaaatccgctgtgcaccagaatctttcctgcaatt
cccggtaataagccgacagttgtatcatgcatcacagttcatgaaaacctcaactttatg
gcaatcggttttaccgatggaagtgttgtcttaaccaagggtgatataactagagacaga
catagtaagacgcagatcctgcaagaggggagttaccccatcacaggcatggctttcagg
caaactgggaagaccactcatctctttgtggtcacaacagaaagtgtcagggtatatgag
ctaagtcagaaggattatccatacacagagttggattctcatggctgtggcctgcgttgc
tccactttgtctgacccatctcaagacatgcaatttgtagttgctggtaatgaatgtata
tatctttaccagtcggacgagaggggaccctgctttgcatttgaaggccagaaactaata
gtacattggtatcgtggttatcttgtgattgtatccagagagagatcagattttgctgga
cgtggtggggatagccatgcacctgacaggcagacactgaccatatatgacctaggaaat
aagcttattgcttacagctgtgttctcagtgatgtggtggatgttctggcagagtggggt
tccctctatgttcttacacgtgatggactccttcatgccttacatgagaaggacacacaa
accaagctagagatgctttttaagaagaatctttatgttatggctatctctttggccaag
ggccagcatttggacagcgatgggctgtctgagatcttccgccagtatggagaccacttg
tatagcaaaggagaccacgatggagccatccaacaatatatccgaacaattgggaagttg
gagccttcctatgttatccgcaaatttctagatgctcagcgcatacacaatttgacagcg
tatctacaggcattgcatctacagtccctagcgaatgcagatcacaccaccctgctactg
aattgctatactaagctaaaggacagcgcccgcttagaagaatttattaaggcgagtgag
ggcgaagtacattttgatgtagaaattgcaatcaaagttcttcgacaagctggctaccat
tcacatgctctctatttggcagaaaaacatgcccatcatgagtggtacttgaagatccaa
ctagaagacatcaagaactttcaggaagctctgcgatacattggacgcctccccttttct
caagctgagagcaatatgaaatgttatgggaaaatactcatgtatcatgtgcccaatgag
acaacccagttactaaatgatctttgcactgacttcccgcagcctggtggagggaacagg
gcaaaccctgaagaatttattccaatatttgctaacaatccttgtgagctaaagaccttt
ttggagcatatgacgaaattacagagtgactctcctcaaggtgtttatgacactttactt
gagttacgtctgcagaactgggcacatgagagtaacccacaggcaaagcagcagctgcag
aatgatgccatgacactcctgaagagcgggcgctttaagaacgtgtttgataaagcgctt
gtcctgtgccagatgcataattttcagaaaggagtgctgtatctgtatgagcaaggaaaa
ctcttccagcagatcatgcattaccacatgcagaatgatcagtaccaagaggtaatagaa
gcctgcaagcagtatggggagcaggagaactgtttgtgggagcaggcacttagttacttt
gcccgcaaggaagaagactgcaaggaacacattgccacagtgttacggcatattgaaagc
aaaaacctcatgcctccattattggtggtgcagacgctggcacataactccactgccacc
ttgtctgtgatcagagactacctgataaacaaaatgcagaaactgagtcagcaggcagag
gaagatgaaaggaccgtgaaccagtacagggaggaaactgctcgcattcgacaggaaatc
catgaattgcggaacagccctaagatctttcagaagactaagtgcagcatctgcagcagt
gctctggagctgccatcggtacactttttgtgtggtcattctttccaccaacactgcttt
gagagttatgcggagagtgactctgactgccccacttgcctgccagagaaccgtcaggtc
cttgatatgatcagggctcaggaagagaagaaggacctctatgaccacttccaacaccag
ttaaagtgctctaatgatggcttcagcgtggtcgcagaatactttgggcgtggtgtattc
aacaaattgacgttgatcacagatgctcctacaggaaggatgactggggtgaaggatgcc
ggactacagcgggaccttcttatcaataccaggagaaatttttaa

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