Hyla sarda (Sardinian treefrog): 130295907
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Entry
130295907 CDS
T11475
Name
(RefSeq) serine/arginine-rich splicing factor 5-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq03040
Spliceosome
hsq05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130295907
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130295907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsq03041
]
130295907
Spliceosome [BR:
hsq03041
]
Common components
Common spliceosomal components
SR proteins
130295907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
Nup35_RRM_2
RRM_5
PAP1
SET_assoc
Transformer
Motif
Other DBs
NCBI-GeneID:
130295907
NCBI-ProteinID:
XP_056403197
LinkDB
All DBs
Position
11:72552449..72583868
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AA seq
289 aa
AA seq
DB search
MTTGRSPRRHLVASHIRRFSVAISFSGNSGGVDKMSGCRVFIGRLSPHARERDVEKFFKG
YGRIREINLKSGFGFVEFEDHRDADDAVYELNGKELCNERVTIEHARNRRGRGGMMGGGG
GRYPMRFGYRQSNSGGPSRYGPPVRTEHRIIVENLSSRVSWQDLKDFMRKAGEVTYVDAH
RGNRNEGVVEFASYSDMKSALDKLDGMELSGRKIKLVEDRKKHRSRSRSRSYSRSRSKSK
SRGSSRSASRSRSPSRTPEKKYSQKSTSGEPSQSSPKRQSRSSSAESRG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaggccgctccccgcgccgccatcttgttgcgagtcatatccggagattctcg
gtcgccatttcattctcgggaaacagcggtggcgttgataaaatgagtggttgcagagta
tttataggaaggcttagtcctcatgctcgtgaaagagacgtggaaaagtttttcaaggga
tatggacgaatcagagaaatcaacttgaaaagtggatttggctttgtggaatttgaagac
cacagagatgcagatgatgcagtgtatgaactgaatggaaaagagctatgtaatgaaaga
gtcacaattgagcatgccagaaatcgaagaggaagagggggaatgatgggtggaggtgga
gggcgctatccaatgcgctttggctaccgtcagtcaaacagtggtggacccagtaggtat
ggacccccagtacgcaccgagcatagaatcatcgtggaaaatctttcctcgcgcgttagc
tggcaggatctgaaggatttcatgagaaaggctggagaggtgacatacgtggatgcacac
aggggtaacagaaatgaaggggttgtggaatttgcatcctacagtgatatgaagagtgct
ttagataagttggatggcatggaacttagtggtcgtaaaatcaagctggttgaagatcgc
aaaaaacacagaagcaggtccagatcaagaagttactctagatcacgcagtaagtccaag
tctcgtggatcttccaggtctgcaagcagatcccgctcccctagccgtactcctgaaaag
aaatatagtcagaaatctacaagtggtgaaccttcccagagctcccccaaacgccagtcc
cgatcaagttcagcagagagccgcggttaa
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