KEGG   Hyla sarda (Sardinian treefrog): 130297327
Entry
130297327         CDS       T11475                                 
Symbol
NTN1
Name
(RefSeq) netrin-1 isoform X1
  KO
K06843  netrin 1
Organism
hsq  Hyla sarda (Sardinian treefrog)
Pathway
hsq04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:hsq00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    130297327 (NTN1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:hsq00536]
    130297327 (NTN1)
Glycosaminoglycan binding proteins [BR:hsq00536]
 Heparan sulfate / Heparin
  Axon guidance molecules
   130297327 (NTN1)
SSDB
Motif
Pfam: Laminin_N NTR EGF_laminin EGF_LMN_ATRN BNR_6
Other DBs
NCBI-GeneID: 130297327
NCBI-ProteinID: XP_056405655
LinkDB
Position
13:complement(7152685..7515072)
AA seq 604 aa
MMLRGQFLLFVLVSLSCTAQESRGGYGMNMFSIQTSQPDPCYDENGNPRRCIPDFVNSAF
GKEVKVSSTCGKNPSRYCVVTEKGEDRFRNCHFCNASDPKKAHPPSFLTDLNNPHNLTCW
QSENYIQYPQNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIFKSMDYGKSWVPFQFYSTQ
CRKMYNKPNKAVITKQNEQEAICTDSHTDMHPLSGGLIAFSTLDGRPSAHDFDNSPVLQD
WVTATDIKVVFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASRCVKDRDD
NLVCDCKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELFKLS
GRRSGGVCLNCRHNTAGRHCHYCKEGYYRDMTKPITHRKACKACDCHPVGAAGKTCNQTT
GQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSTEEPADCETYCKASK
GKLKINMKKYCKKDYAVQIHILKADKLGDWWKFTVNVISVYKQGTNRIRRGDQNLWIRSK
DIACKCPKLKPMKKYLLLGNDEDLPDQNGVVADKTSLVIQWRDTWARRLRKFQQREKKGK
CKKA
NT seq 1815 nt   +upstreamnt  +downstreamnt
atgatgctgagagggcagtttttgctgttcgtgctagtttctttgtcttgtaccgctcaa
gaaagtagaggaggatatgggatgaatatgttttccatccagacgtcacagcctgatcca
tgctacgatgagaatgggaaccctaggagatgtattccggactttgtaaactcagctttt
gggaaggaagtcaaagtgtcaagcacctgtgggaagaacccatcaaggtattgtgtggtg
acggaaaaaggggaggatagattcaggaactgtcatttttgcaatgcctcggaccctaaa
aaagcccatccgccctcttttctaactgatctcaacaacccccacaacctcacctgctgg
caatcagagaactatatacagtatcctcagaacgtcaccctaaccttgtccctagggaag
aagtttgaggtgacttacgtgagcctccaattctgttctccaagaccggaatccatggct
attttcaaatctatggactatgggaaatcgtgggtaccatttcagttctactcaacccaa
tgtcgaaaaatgtacaataaacccaataaagcagtcattactaagcagaatgagcaagag
gctatctgcacagactctcatacagatatgcaccctctctctggaggtttgatagccttc
agcaccttggatggtagaccctctgcacatgactttgacaactccccagtccttcaagac
tgggtgacagccacggacatcaaggtggtgtttagtcgtcttcacacttttggagatgaa
aatgaagacgactcagaattggccagagactcttacttttatgctgtttctgaccttcaa
gttggaggtcggtgtaagtgcaacggacatgcctcgagatgcgttaaagatagagatgat
aacctggtgtgcgactgcaagcacaacactgctggacctgagtgtgaccgctgcaaacct
ttccactacgacagaccttggcagcgagcaacagcgagagaggccaacgagtgtgtggcc
tgcaactgtaacctgcatgcacgccgctgccgtttcaacatggagctcttcaagctgtcg
ggacgccggagcggaggggtctgcttgaactgccggcataatactgctggtcgtcactgc
cactactgtaaggagggttactaccgggacatgaccaagcccatcacccacagaaaagct
tgtaaagcctgcgactgccatccggttggtgcggccggcaaaacctgtaatcagaccaca
gggcaatgtccttgcaaagatggtgtgactggtataacgtgcaatcgatgtgccaagggc
taccaacaaagccgctctcccattgccccctgcataaagatacctgtagctcctcccact
acggcagccagcagcacagaggaaccagccgactgtgagacttactgcaaagcatcaaaa
ggaaagctaaagattaacatgaaaaagtactgcaagaaggattatgcggttcagattcat
atcttaaaggccgacaaattaggagattggtggaaattcacagtcaatgtcatctcagtc
tataaacaaggcaccaatcgaatccgcagaggggaccagaatctttggatccgttcgaaa
gacatcgcctgcaagtgcccaaaactcaagcctatgaagaagtacctcctcctgggcaac
gatgaggacttacctgaccaaaatggggtggtggcagacaagaccagcttggtcatacag
tggagggacacatgggccagacggctgagaaaattccaacagcgagaaaagaaaggaaag
tgcaagaaagcctag

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