Hyla sarda (Sardinian treefrog): 130297327
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Entry
130297327 CDS
T11475
Symbol
NTN1
Name
(RefSeq) netrin-1 isoform X1
KO
K06843
netrin 1
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130297327 (NTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hsq00536
]
130297327 (NTN1)
Glycosaminoglycan binding proteins [BR:
hsq00536
]
Heparan sulfate / Heparin
Axon guidance molecules
130297327 (NTN1)
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Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
BNR_6
Motif
Other DBs
NCBI-GeneID:
130297327
NCBI-ProteinID:
XP_056405655
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Position
13:complement(7152685..7515072)
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AA seq
604 aa
AA seq
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MMLRGQFLLFVLVSLSCTAQESRGGYGMNMFSIQTSQPDPCYDENGNPRRCIPDFVNSAF
GKEVKVSSTCGKNPSRYCVVTEKGEDRFRNCHFCNASDPKKAHPPSFLTDLNNPHNLTCW
QSENYIQYPQNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIFKSMDYGKSWVPFQFYSTQ
CRKMYNKPNKAVITKQNEQEAICTDSHTDMHPLSGGLIAFSTLDGRPSAHDFDNSPVLQD
WVTATDIKVVFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASRCVKDRDD
NLVCDCKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELFKLS
GRRSGGVCLNCRHNTAGRHCHYCKEGYYRDMTKPITHRKACKACDCHPVGAAGKTCNQTT
GQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSTEEPADCETYCKASK
GKLKINMKKYCKKDYAVQIHILKADKLGDWWKFTVNVISVYKQGTNRIRRGDQNLWIRSK
DIACKCPKLKPMKKYLLLGNDEDLPDQNGVVADKTSLVIQWRDTWARRLRKFQQREKKGK
CKKA
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgagagggcagtttttgctgttcgtgctagtttctttgtcttgtaccgctcaa
gaaagtagaggaggatatgggatgaatatgttttccatccagacgtcacagcctgatcca
tgctacgatgagaatgggaaccctaggagatgtattccggactttgtaaactcagctttt
gggaaggaagtcaaagtgtcaagcacctgtgggaagaacccatcaaggtattgtgtggtg
acggaaaaaggggaggatagattcaggaactgtcatttttgcaatgcctcggaccctaaa
aaagcccatccgccctcttttctaactgatctcaacaacccccacaacctcacctgctgg
caatcagagaactatatacagtatcctcagaacgtcaccctaaccttgtccctagggaag
aagtttgaggtgacttacgtgagcctccaattctgttctccaagaccggaatccatggct
attttcaaatctatggactatgggaaatcgtgggtaccatttcagttctactcaacccaa
tgtcgaaaaatgtacaataaacccaataaagcagtcattactaagcagaatgagcaagag
gctatctgcacagactctcatacagatatgcaccctctctctggaggtttgatagccttc
agcaccttggatggtagaccctctgcacatgactttgacaactccccagtccttcaagac
tgggtgacagccacggacatcaaggtggtgtttagtcgtcttcacacttttggagatgaa
aatgaagacgactcagaattggccagagactcttacttttatgctgtttctgaccttcaa
gttggaggtcggtgtaagtgcaacggacatgcctcgagatgcgttaaagatagagatgat
aacctggtgtgcgactgcaagcacaacactgctggacctgagtgtgaccgctgcaaacct
ttccactacgacagaccttggcagcgagcaacagcgagagaggccaacgagtgtgtggcc
tgcaactgtaacctgcatgcacgccgctgccgtttcaacatggagctcttcaagctgtcg
ggacgccggagcggaggggtctgcttgaactgccggcataatactgctggtcgtcactgc
cactactgtaaggagggttactaccgggacatgaccaagcccatcacccacagaaaagct
tgtaaagcctgcgactgccatccggttggtgcggccggcaaaacctgtaatcagaccaca
gggcaatgtccttgcaaagatggtgtgactggtataacgtgcaatcgatgtgccaagggc
taccaacaaagccgctctcccattgccccctgcataaagatacctgtagctcctcccact
acggcagccagcagcacagaggaaccagccgactgtgagacttactgcaaagcatcaaaa
ggaaagctaaagattaacatgaaaaagtactgcaagaaggattatgcggttcagattcat
atcttaaaggccgacaaattaggagattggtggaaattcacagtcaatgtcatctcagtc
tataaacaaggcaccaatcgaatccgcagaggggaccagaatctttggatccgttcgaaa
gacatcgcctgcaagtgcccaaaactcaagcctatgaagaagtacctcctcctgggcaac
gatgaggacttacctgaccaaaatggggtggtggcagacaagaccagcttggtcatacag
tggagggacacatgggccagacggctgagaaaattccaacagcgagaaaagaaaggaaag
tgcaagaaagcctag
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